| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476708
Identifier: 113476708
GI number: 113476708
Start: 4836721
End: 4836969
Strand: Reverse
Name: 113476708
Synonym: Tery_3168
Alternate gene names: NA
Gene position: 4836969-4836721 (Counterclockwise)
Preceding gene: 113476709
Following gene: 113476707
Centisome position: 62.41
GC content: 30.12
Gene sequence:
>249_bases ATGAGAGATAAAACTATGGAAAAAATACCAGTTCCCTCTCGTATTCATTATGAACTACTACTTCAATTATTAGAAAAAAA GACAATTGTGGCAGTAGATTATAACACAAAAGAGTCCCAAAAAGTTCAAGAACTTATTGTGGCTGTGAGGAAAGCTTTAG CACTGCAAAAACAGTTAGAAGAATGCTGTAAACAAGCAAATTTACCAATAGAATATTACTGGTCTATTAATGAAACTAAA AAATATTAA
Upstream 100 bases:
>100_bases AGGAAAAATTGAGGTGACGAGGTAATATAAGATTTATGCCTTTAGCGAAGATTAAATCCCCCAATACTTTAATTCGGGAA GTGGGAAATTACTAAATACA
Downstream 100 bases:
>100_bases AAATATTAGGGGCTATGGCTAGATTAAATTATTTGTAGTGAATTTCTTAATGAAAAAAAAATAGCTTATAAACTTTTGTT TGGTAAAATTACTCTTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRDKTMEKIPVPSRIHYELLLQLLEKKTIVAVDYNTKESQKVQELIVAVRKALALQKQLEECCKQANLPIEYYWSINETK KY
Sequences:
>Translated_82_residues MRDKTMEKIPVPSRIHYELLLQLLEKKTIVAVDYNTKESQKVQELIVAVRKALALQKQLEECCKQANLPIEYYWSINETK KY >Mature_82_residues MRDKTMEKIPVPSRIHYELLLQLLEKKTIVAVDYNTKESQKVQELIVAVRKALALQKQLEECCKQANLPIEYYWSINETK KY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9726; Mature: 9726
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDKTMEKIPVPSRIHYELLLQLLEKKTIVAVDYNTKESQKVQELIVAVRKALALQKQLE CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH ECCKQANLPIEYYWSINETKKY HHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure MRDKTMEKIPVPSRIHYELLLQLLEKKTIVAVDYNTKESQKVQELIVAVRKALALQKQLE CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH ECCKQANLPIEYYWSINETKKY HHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2129525 [H]