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The map label for this gene is 113476707

Identifier: 113476707

GI number: 113476707

Start: 4835143

End: 4836300

Strand: Reverse

Name: 113476707

Synonym: Tery_3167

Alternate gene names: NA

Gene position: 4836300-4835143 (Counterclockwise)

Preceding gene: 113476708

Following gene: 113476701

Centisome position: 62.4

GC content: 40.85

Gene sequence:

>1158_bases
ATGGATGATAAATTGATGTTAATGATTCCTGGACCAACTCCAGTGCCAGAAACAGCATTACTCGCAATGGCCAAACATCC
AATAGGCCATAGAAGCGGTGACTTTTCTAAAATTATGGCAGAGGTGACAGAAAACCTTAAATGGTTACATCAAACTAAAA
ATGATATGTTGATCTTAGCATCTAGTGGTACTGGAGCTATGGAGGCAGGTATAATTAATTTCCTCAGTCCAGGCGATCGC
GTACTATGTGGATGTAATGGTAAATTTGGCGACCGCTGGGCAGAAGTCGCGACAGCTTATGGTCTCCAAGTTGAGAAAAT
TACAGCAGAGTGGGGTAAAGCTTTAGAGACAGAGAAATTTCGTCAACACCTAGAAGCAGATAAAGACAAACAAATTAAAG
CAGTTATTCTTACCCATAGCGAAACTTCTACAGGTGTTCTAAATGATCTAGAAACTATTAATGGTTATGTTAAAGCTCAT
GGTGAAGCTTTGATTATTGTAGATGCTGTCACAAGTCTTGGGGCAGTCAGTATACCAGTAGATGAGTTGGGTCTTGATGT
TGTTGCTTCTGGTTCTCAAAAAGGTTACATGATACCTCCTGGTTTAGCTTTTGTGGCAGTGGGACCTAAAGCTTGGACTG
CTTATGAAACTGCTAAGTTACCACGCTACTACCTTGACTTAGGTAAGTATCGTAAAGATGCAGCTAAAAACACTACACCC
TTTACCCCACCAGTAAATTTGTTCTTTGCTTTGCAGGCCACACTTAGAATAATGCAAGCCGAAGGATTAGAAAATATTTT
TGCTCGACATGATCGTTTAAAAAGTGCAACTCGCGCAGCTATCAAAGCTTTAGGCTTGCCCTTACTGGCTTCAGATAAAG
TAGCTAGTCCTGCTGTTACAGCAGTTGCTCCACCAACAGAAGTAGAGGCAGAAAAAGTACGGGCTATTATGAAAAAACGT
TTTGATATTGCTTTAGCTGGTGGACAAGACCACTTGAAAGGGAAAATTTTTCGCATTGGACATTTAGGTTTTGTCTGTGA
AAGAGACGTCACAAGCGCGATCGCTGCCTTAGAAGTTACTTTGAGAGATTTGGGATATGAATCTTTTACCCCAGGAGAAG
CTCTAGCTGCTGCTTCTAGAGTTTTAGTAGAATCATAA

Upstream 100 bases:

>100_bases
GCTTATGAAGCTTAAAGAAAAAGTAAGCTTTTACTGTGATGTGCTTCTGTATAAATAAACATAGACACCGTTCAAATTAA
ACATAATAAAGGAAAAAAAA

Downstream 100 bases:

>100_bases
TTAAATTGATTAAATTAATAGTTTAGTAGTTATAGCAATCCTAAATTTGTTGCGATAATGTTTATAACAGTTAATTTTAA
CTGAAACCTTTAAAAGTCTG

Product: Serine--glyoxylate transaminase

Products: NA

Alternate protein names: Tritium exchange subunit [H]

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MDDKLMLMIPGPTPVPETALLAMAKHPIGHRSGDFSKIMAEVTENLKWLHQTKNDMLILASSGTGAMEAGIINFLSPGDR
VLCGCNGKFGDRWAEVATAYGLQVEKITAEWGKALETEKFRQHLEADKDKQIKAVILTHSETSTGVLNDLETINGYVKAH
GEALIIVDAVTSLGAVSIPVDELGLDVVASGSQKGYMIPPGLAFVAVGPKAWTAYETAKLPRYYLDLGKYRKDAAKNTTP
FTPPVNLFFALQATLRIMQAEGLENIFARHDRLKSATRAAIKALGLPLLASDKVASPAVTAVAPPTEVEAEKVRAIMKKR
FDIALAGGQDHLKGKIFRIGHLGFVCERDVTSAIAALEVTLRDLGYESFTPGEALAAASRVLVES

Sequences:

>Translated_385_residues
MDDKLMLMIPGPTPVPETALLAMAKHPIGHRSGDFSKIMAEVTENLKWLHQTKNDMLILASSGTGAMEAGIINFLSPGDR
VLCGCNGKFGDRWAEVATAYGLQVEKITAEWGKALETEKFRQHLEADKDKQIKAVILTHSETSTGVLNDLETINGYVKAH
GEALIIVDAVTSLGAVSIPVDELGLDVVASGSQKGYMIPPGLAFVAVGPKAWTAYETAKLPRYYLDLGKYRKDAAKNTTP
FTPPVNLFFALQATLRIMQAEGLENIFARHDRLKSATRAAIKALGLPLLASDKVASPAVTAVAPPTEVEAEKVRAIMKKR
FDIALAGGQDHLKGKIFRIGHLGFVCERDVTSAIAALEVTLRDLGYESFTPGEALAAASRVLVES
>Mature_385_residues
MDDKLMLMIPGPTPVPETALLAMAKHPIGHRSGDFSKIMAEVTENLKWLHQTKNDMLILASSGTGAMEAGIINFLSPGDR
VLCGCNGKFGDRWAEVATAYGLQVEKITAEWGKALETEKFRQHLEADKDKQIKAVILTHSETSTGVLNDLETINGYVKAH
GEALIIVDAVTSLGAVSIPVDELGLDVVASGSQKGYMIPPGLAFVAVGPKAWTAYETAKLPRYYLDLGKYRKDAAKNTTP
FTPPVNLFFALQATLRIMQAEGLENIFARHDRLKSATRAAIKALGLPLLASDKVASPAVTAVAPPTEVEAEKVRAIMKKR
FDIALAGGQDHLKGKIFRIGHLGFVCERDVTSAIAALEVTLRDLGYESFTPGEALAAASRVLVES

Specific function: Soluble hydrogenase catalyzes both production and consumption of hydrogen from suitable artificial electron donors or acceptors. This subunit catalyzes the tritium-exchange activity [H]

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=363, Percent_Identity=31.6804407713499, Blast_Score=168, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17536281, Length=347, Percent_Identity=33.4293948126801, Blast_Score=159, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6321079, Length=375, Percent_Identity=28.5333333333333, Blast_Score=110, Evalue=3e-25,
Organism=Drosophila melanogaster, GI17530823, Length=345, Percent_Identity=29.8550724637681, Blast_Score=144, Evalue=9e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR020578
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 41447; Mature: 41447

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKLMLMIPGPTPVPETALLAMAKHPIGHRSGDFSKIMAEVTENLKWLHQTKNDMLILA
CCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
SSGTGAMEAGIINFLSPGDRVLCGCNGKFGDRWAEVATAYGLQVEKITAEWGKALETEKF
CCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEHHHHHHHCCHHHH
RQHLEADKDKQIKAVILTHSETSTGVLNDLETINGYVKAHGEALIIVDAVTSLGAVSIPV
HHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHEECCCEEEEEEEHHHCCEEECCH
DELGLDVVASGSQKGYMIPPGLAFVAVGPKAWTAYETAKLPRYYLDLGKYRKDAAKNTTP
HHHCCEEEECCCCCCEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
FTPPVNLFFALQATLRIMQAEGLENIFARHDRLKSATRAAIKALGLPLLASDKVASPAVT
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEE
AVAPPTEVEAEKVRAIMKKRFDIALAGGQDHLKGKIFRIGHLGFVCERDVTSAIAALEVT
ECCCCCCCCHHHHHHHHHHCCCEEEECCCHHHCCEEEEEECCCEEECHHHHHHHHHHHHH
LRDLGYESFTPGEALAAASRVLVES
HHHCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDDKLMLMIPGPTPVPETALLAMAKHPIGHRSGDFSKIMAEVTENLKWLHQTKNDMLILA
CCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
SSGTGAMEAGIINFLSPGDRVLCGCNGKFGDRWAEVATAYGLQVEKITAEWGKALETEKF
CCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEHHHHHHHCCHHHH
RQHLEADKDKQIKAVILTHSETSTGVLNDLETINGYVKAHGEALIIVDAVTSLGAVSIPV
HHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHEECCCEEEEEEEHHHCCEEECCH
DELGLDVVASGSQKGYMIPPGLAFVAVGPKAWTAYETAKLPRYYLDLGKYRKDAAKNTTP
HHHCCEEEECCCCCCEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
FTPPVNLFFALQATLRIMQAEGLENIFARHDRLKSATRAAIKALGLPLLASDKVASPAVT
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEE
AVAPPTEVEAEKVRAIMKKRFDIALAGGQDHLKGKIFRIGHLGFVCERDVTSAIAALEVT
ECCCCCCCCHHHHHHHHHHCCCEEEECCCHHHCCEEEEEECCCEEECHHHHHHHHHHHHH
LRDLGYESFTPGEALAAASRVLVES
HHHCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2513553 [H]