| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is tcmN [H]
Identifier: 113476665
GI number: 113476665
Start: 4777278
End: 4778384
Strand: Reverse
Name: tcmN [H]
Synonym: Tery_3121
Alternate gene names: 113476665
Gene position: 4778384-4777278 (Counterclockwise)
Preceding gene: 113476666
Following gene: 113476664
Centisome position: 61.66
GC content: 29.63
Gene sequence:
>1107_bases ATGATGAAAAAGATAGAAATTTCTTCTCATAATGTTCATACAGATTTACAAACGTTGCAGTTAATTAATAGTAATCAAGA CTCCTTAAAAATGGATGATTTAGTCTTGCTATTACATGGCCACTTAGCATTTCAAAATCTTTATGCTGGTTGTGAACTTG GTGTATTTGAATTACTATTCAATCAAGGAGATTTATCAGCTCTAGAAATTAGTACAAAATTAAAACTTGAAGATTATCCT ACTAAAGCTTTATTGTTAGCTTTAACAGGATTAAAATTACTAATAAAAGTTGAAAATAAATATCATAATAGTCTAGTAAT TCAGATGTTATTCCTGGAAAAAACTTGGCAAGAATTTTATGATGTAGTTCTTTTTGAAGCAAAAATTGTATATCGTGGTT GTATAGATTATGTAGAATCTTTACGTCAAAATACAAACGTTGGTTTACGTCGGTTTGAAGGCAAAGGAGAAGATTTATAT AATCGTTTACATCAAAATACAGGACTAGACCAAGTATTTTATAACTTTATGGGTTCATGGTCAAAATTAGTTAATCCTTT ACTATTTGAAAATGTTGACTTTTCTAACTTCAAAAATATTGTAGATGTTGGTGGTGGAGACGCAACAAATTCAATAGCTT TAGCCAAAGCTTTTCCCGATGTAAATATTACATTGATGGATATTCCTGATAGTTGTAAAATTGCTCAAAAAAATATTGAA CAAAACCAATTAAGTGACAGAATAACAGTATTTAAATCTAATATTTTTGTAGATGAATTTCTTCAAAATCAAGATTGTTT TCTCTTTATTCATGTCTTAGTAATTTGGTCATTAGATAAAAATACCATTTTATTACGACGAGCTTATGAAGCACTTAACC CCGGTGGCTCTGTTGTTATTTTTAACATGATGAGTAATGATTATGAAGATGGACCCTTGATGGGAGCCTTAGATTCATCT TACTTTGTTTCTATTCCTCATGAGGGTGGTATGATTTACTCTTGGAAAGATCATGAGCAATGTTTAAAAGATGCAGGATT TACAAAAATAAAACGTATTCCCTGTAATTTTTGGGCTCCTAGTGGAATTATTGTAGCTACTAAATAA
Upstream 100 bases:
>100_bases GCATAAAAGAAAGGGTTATTATTGTTCATATCTGACAGCTAATAGCTGATTGCTTACAAAAAATTAATTTACCAATAACA AAATCAACAAGGATAATTTG
Downstream 100 bases:
>100_bases ATACTAGTATCCGCTCAATAAATTGGGGAAAGAAGAGAAAAAGTACACCTAGTGTTGTAAAATATGACTCATGAGGCAAA AACTATCATCAGAGAAATTA
Product: O-methyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MMKKIEISSHNVHTDLQTLQLINSNQDSLKMDDLVLLLHGHLAFQNLYAGCELGVFELLFNQGDLSALEISTKLKLEDYP TKALLLALTGLKLLIKVENKYHNSLVIQMLFLEKTWQEFYDVVLFEAKIVYRGCIDYVESLRQNTNVGLRRFEGKGEDLY NRLHQNTGLDQVFYNFMGSWSKLVNPLLFENVDFSNFKNIVDVGGGDATNSIALAKAFPDVNITLMDIPDSCKIAQKNIE QNQLSDRITVFKSNIFVDEFLQNQDCFLFIHVLVIWSLDKNTILLRRAYEALNPGGSVVIFNMMSNDYEDGPLMGALDSS YFVSIPHEGGMIYSWKDHEQCLKDAGFTKIKRIPCNFWAPSGIIVATK
Sequences:
>Translated_368_residues MMKKIEISSHNVHTDLQTLQLINSNQDSLKMDDLVLLLHGHLAFQNLYAGCELGVFELLFNQGDLSALEISTKLKLEDYP TKALLLALTGLKLLIKVENKYHNSLVIQMLFLEKTWQEFYDVVLFEAKIVYRGCIDYVESLRQNTNVGLRRFEGKGEDLY NRLHQNTGLDQVFYNFMGSWSKLVNPLLFENVDFSNFKNIVDVGGGDATNSIALAKAFPDVNITLMDIPDSCKIAQKNIE QNQLSDRITVFKSNIFVDEFLQNQDCFLFIHVLVIWSLDKNTILLRRAYEALNPGGSVVIFNMMSNDYEDGPLMGALDSS YFVSIPHEGGMIYSWKDHEQCLKDAGFTKIKRIPCNFWAPSGIIVATK >Mature_368_residues MMKKIEISSHNVHTDLQTLQLINSNQDSLKMDDLVLLLHGHLAFQNLYAGCELGVFELLFNQGDLSALEISTKLKLEDYP TKALLLALTGLKLLIKVENKYHNSLVIQMLFLEKTWQEFYDVVLFEAKIVYRGCIDYVESLRQNTNVGLRRFEGKGEDLY NRLHQNTGLDQVFYNFMGSWSKLVNPLLFENVDFSNFKNIVDVGGGDATNSIALAKAFPDVNITLMDIPDSCKIAQKNIE QNQLSDRITVFKSNIFVDEFLQNQDCFLFIHVLVIWSLDKNTILLRRAYEALNPGGSVVIFNMMSNDYEDGPLMGALDSS YFVSIPHEGGMIYSWKDHEQCLKDAGFTKIKRIPCNFWAPSGIIVATK
Specific function: The N-terminal domain enhances the formation of an early, partially cyclized intermediate, while the C-terminal domain catalyzes the 3-O-methylation of one or more later intermediates in the biosynthetic pathway. Catalyzes the methylation of tetracenomyci
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI291045181, Length=273, Percent_Identity=23.4432234432234, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI291045183, Length=273, Percent_Identity=23.4432234432234, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI117553627, Length=273, Percent_Identity=23.4432234432234, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI283549144, Length=317, Percent_Identity=24.2902208201893, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI157168360, Length=317, Percent_Identity=24.2902208201893, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001077 - InterPro: IPR005031 - InterPro: IPR011991 [H]
Pfam domain/function: PF00891 Methyltransf_2; PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 41876; Mature: 41876
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKIEISSHNVHTDLQTLQLINSNQDSLKMDDLVLLLHGHLAFQNLYAGCELGVFELLF CCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHEEEEHHHHHHHHHHHCCCCHHHHHHHH NQGDLSALEISTKLKLEDYPTKALLLALTGLKLLIKVENKYHNSLVIQMLFLEKTWQEFY CCCCCEEEEEEEEEEECCCCHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHH DVVLFEAKIVYRGCIDYVESLRQNTNVGLRRFEGKGEDLYNRLHQNTGLDQVFYNFMGSW HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHCCH SKLVNPLLFENVDFSNFKNIVDVGGGDATNSIALAKAFPDVNITLMDIPDSCKIAQKNIE HHHCCHHHHCCCCHHHCCHHEECCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHCCH QNQLSDRITVFKSNIFVDEFLQNQDCFLFIHVLVIWSLDKNTILLRRAYEALNPGGSVVI HHHHHHHHEEHHHHCHHHHHHCCCCHHHHEEEHHHHCCCCCEEHHHHHHHHHCCCCCEEE FNMMSNDYEDGPLMGALDSSYFVSIPHEGGMIYSWKDHEQCLKDAGFTKIKRIPCNFWAP EEECCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCHHHHHHHCCCCEEEECCCCCCCC SGIIVATK CCEEEEEC >Mature Secondary Structure MMKKIEISSHNVHTDLQTLQLINSNQDSLKMDDLVLLLHGHLAFQNLYAGCELGVFELLF CCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHEEEEHHHHHHHHHHHCCCCHHHHHHHH NQGDLSALEISTKLKLEDYPTKALLLALTGLKLLIKVENKYHNSLVIQMLFLEKTWQEFY CCCCCEEEEEEEEEEECCCCHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHH DVVLFEAKIVYRGCIDYVESLRQNTNVGLRRFEGKGEDLYNRLHQNTGLDQVFYNFMGSW HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHCCH SKLVNPLLFENVDFSNFKNIVDVGGGDATNSIALAKAFPDVNITLMDIPDSCKIAQKNIE HHHCCHHHHCCCCHHHCCHHEECCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHCCH QNQLSDRITVFKSNIFVDEFLQNQDCFLFIHVLVIWSLDKNTILLRRAYEALNPGGSVVI HHHHHHHHEEHHHHCHHHHHHCCCCHHHHEEEHHHHCCCCCEEHHHHHHHHHCCCCCEEE FNMMSNDYEDGPLMGALDSSYFVSIPHEGGMIYSWKDHEQCLKDAGFTKIKRIPCNFWAP EEECCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCHHHHHHHCCCCEEEECCCCCCCC SGIIVATK CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1548230; 2684656 [H]