Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476656

Identifier: 113476656

GI number: 113476656

Start: 4763040

End: 4763267

Strand: Reverse

Name: 113476656

Synonym: Tery_3111

Alternate gene names: NA

Gene position: 4763267-4763040 (Counterclockwise)

Preceding gene: 113476657

Following gene: 113476644

Centisome position: 61.46

GC content: 43.42

Gene sequence:

>228_bases
GTGATTAGGCAGCATGGCAACTGTAAAGCCCTACCCGCCCCCAGAGATGAGAACCTCAGAGGAGTTCGTCAAATAGGACG
GCAAAAATGGAAGCATGAAAGTGGATACCATAGACGCTCTCTATCTGAAACCACTATGTTTAGGTTCAAAGTTTTATTTA
GTGGGAAGTTACGAAGACGATCATTTGATATCAAGCAGTGGAGTTATTCATTCAATGCGCTATCCTGA

Upstream 100 bases:

>100_bases
TAGATGGAGTAGAAGGTGAAATAGCCCAAGTTTCAGGTGATGGGGCTGATGACAAATACAAGTGCTATGAAACAGCTCAC
CAAAGAGGCGTAAAAATGCT

Downstream 100 bases:

>100_bases
ACCCCATGATACAGAATGGTAAACCCGAAAGTTATCAAGTACACCTGCATCTCTCCAGGGAGTCATCTGCGATCGCAACA
TTCATGCAACAAAGCCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRRSFDIKQWSYSFNALS

Sequences:

>Translated_75_residues
MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRRSFDIKQWSYSFNALS
>Mature_75_residues
MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRRSFDIKQWSYSFNALS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8997; Mature: 8997

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCC
SFDIKQWSYSFNALS
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRQHGNCKALPAPRDENLRGVRQIGRQKWKHESGYHRRSLSETTMFRFKVLFSGKLRRR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCC
SFDIKQWSYSFNALS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA