Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is plsY [H]

Identifier: 113476637

GI number: 113476637

Start: 4742285

End: 4742875

Strand: Reverse

Name: plsY [H]

Synonym: Tery_3089

Alternate gene names: 113476637

Gene position: 4742875-4742285 (Counterclockwise)

Preceding gene: 113476642

Following gene: 113476635

Centisome position: 61.2

GC content: 36.21

Gene sequence:

>591_bases
TTGTCACGATCGCATAGAAAAAATGTCAGTCATGTAGCAGGATGTATACTACACATAAAGACATTGGTAGTATGTAAAGA
TGCCAGCGCTCATTGCTATATTGATATTTTCAAGGGGGTATTAGCGATCGCTTTGGTTCGCTATATTTACTCTCTAGTGT
TTGACCAAAACCTAACTATTGTTGCTGGAGTAACTGACATTAATATAGCAAAAGAATGGATGGTTATTTTAACAGGATTA
ATTGCTATAGTAGGTCATACTAAATCTATTTGGATTGGTTTTAAGGGTGGCAAGCCTGTTGCTTCTAGTCTGGGTATTTT
GTTAGCAATGTCTTGGGTTGTTGGTTTAGGAACACTTTCTGTATTTATTGTTGTTCTGATGATTAGTCGTATTGTTTCTT
TGAGTTCTATTATCGCTGCTATTACTGTTTCTGGTTTAATGTTTTTGACAGGTCAATCACTTCCTTATAGAACCCCTGAG
TGTATCTTTTTTTGCCGTTCAGGCGATCGCCAATCTCTTAAGCATAAGTCTAACAAAACAAAGATTAATCTTGGTGGTGG
CATTCTCAAGAGTTCCCATCAATTTTTTTGA

Upstream 100 bases:

>100_bases
TTGTGCCACACGCTTATTGTTACCATATTTTCTATCTTTATACAACAAAGCCCAGGCATGGCATAAAACTTTAAGGTAGT
GCGATTGCGCCTCCGTTCCG

Downstream 100 bases:

>100_bases
CTAAACTCTTACATCTTTCCATCCAAGAATTAGTTCTTTCAATGACCCATCTGATTAAACCCCCCTTTGTCCCTGCTTCT
TCTTCGAGGGCTTTCGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTIVAGVTDINIAKEWMVILTGL
IAIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLSVFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPE
CIFFCRSGDRQSLKHKSNKTKINLGGGILKSSHQFF

Sequences:

>Translated_196_residues
MSRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTIVAGVTDINIAKEWMVILTGL
IAIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLSVFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPE
CIFFCRSGDRQSLKHKSNKTKINLGGGILKSSHQFF
>Mature_195_residues
SRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTIVAGVTDINIAKEWMVILTGLI
AIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLSVFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPEC
IFFCRSGDRQSLKHKSNKTKINLGGGILKSSHQFF

Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]

COG id: COG0344

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the plsY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003811 [H]

Pfam domain/function: PF02660 DUF205 [H]

EC number: NA

Molecular weight: Translated: 21292; Mature: 21161

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTI
CCCCHHCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VAGVTDINIAKEWMVILTGLIAIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLS
EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPECIFFCRSGDRQSLKHKSNKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCC
KINLGGGILKSSHQFF
EEEECCCCCCCCCCCC
>Mature Secondary Structure 
SRSHRKNVSHVAGCILHIKTLVVCKDASAHCYIDIFKGVLAIALVRYIYSLVFDQNLTI
CCCHHCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VAGVTDINIAKEWMVILTGLIAIVGHTKSIWIGFKGGKPVASSLGILLAMSWVVGLGTLS
EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VFIVVLMISRIVSLSSIIAAITVSGLMFLTGQSLPYRTPECIFFCRSGDRQSLKHKSNKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCC
KINLGGGILKSSHQFF
EEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA