Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476627

Identifier: 113476627

GI number: 113476627

Start: 4729568

End: 4729690

Strand: Reverse

Name: 113476627

Synonym: Tery_3072

Alternate gene names: NA

Gene position: 4729690-4729568 (Counterclockwise)

Preceding gene: 113476635

Following gene: 113476624

Centisome position: 61.03

GC content: 34.15

Gene sequence:

>123_bases
TTGCGTCAAAGAATTTCTCGGTTGGTCAGAAAGACTTTATCCTTTTCTAAAAAGCTAGAAAACCATCTAGGAGCTATTTG
GTATTTCATTAATCATTATAATGAAGCGATCGCTTCACTGTAA

Upstream 100 bases:

>100_bases
CATCAAACTTTTCCCAGGCCAGTAATTAACGTAAAATACATATCAGGTATACATTATACCCTTTTTTTTACTATTTTTTC
ACTAAAGTCCCGATAATACT

Downstream 100 bases:

>100_bases
TTTTATCACTACATATACAGGACTACCCCCACATTACTTGAAGACGACGCTCATTCACAGCATCTACAGACCAATTTGCT
CGAACTAGAAAATGCCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 40; Mature: 40

Protein sequence:

>40_residues
MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL

Sequences:

>Translated_40_residues
MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL
>Mature_40_residues
MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4806; Mature: 4806

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQRISRLVRKTLSFSKKLENHLGAIWYFINHYNEAIASL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA