Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476041

Identifier: 113476041

GI number: 113476041

Start: 3719938

End: 3720738

Strand: Direct

Name: 113476041

Synonym: Tery_2412

Alternate gene names: NA

Gene position: 3719938-3720738 (Clockwise)

Preceding gene: 113476040

Following gene: 113476045

Centisome position: 48.0

GC content: 34.46

Gene sequence:

>801_bases
ATGCTAATAATAATCAGCAACATTATCGCAATTTACAGAAAAGAATTACAAGGATATTTTGCCTCACCATTAGCTTATAC
AATTACAGGAATATTTTGGCTATTGGGAGGATACTTTTTAGTAGCTATTTTATTAGGACCAGATGGAATTATTCAACAAA
TTGCTACTAGAGACCAACTAGGAATTACAGAACCGCCAGTCGATGCACCCTACGAATTTTTGAAGGCTTATCTGGGTATT
ATGGGTTCTCTTTCTTTATTTTTATTGCCTATGTTATCTATGAGTTTATATGCGGAAGAAAGAAAACGAGGCACTTTAGA
ATTATTAGCAACTTCACCTTTAACTAACTGGACAGTGGCAACAGGAAAATTATTAGCTGTATTAACATTTTATATTTCTA
TGGTATTGCCATTGTTGGGTTTGGAGGCTATTGCTCTTAATGCAGCAAAGCCACCTATTTCACCACTTTTATTATTGTCA
GGACATGGGGGTTTAATATTACTAGCTGCGGCGGTATTATCATTAGGAATGTTTGTTTCTTCTTTAACAGATAGTGCTAT
TTTATCTGCCATTCTGACATTTGCTTTGGTATTATTTCTCTGGGTAATTGATGTGGTAGCTAATGCTGTTAGTGGTCCTT
TTGCACAGGCATTAAAACATTTATCTATGCTGACACATTACACTAATATTATTCAGGGACTTGTAGATACTGGCAGTATA
ATTATGTTGTTGAGTTATGTTGTTTTGGGAGTATTTTTAACTGCTCAATCAATTGATGCTTTAAGGTTCCAACGTTCTTA
A

Upstream 100 bases:

>100_bases
ATCAAAAACCTTATCAGAAGGTTTCATAAAAGGTTACTACTGTGGTCTAATTAAGTGAAAACTGCTATAAATAAACGTAA
CTAAGGAAGGAAGTAAATTA

Downstream 100 bases:

>100_bases
TATTCAGGAAGAATACGGAAGTTAAAGGGAAAAAATTAGAGGCAAAAAAAAGGTTCATAAGAGAGAAGTTTTTTTTATGA
CTATAGGGTTGAAAATTTTG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: ABC-2 Type Transporter Superfamily; ABC Transporter Permease; ABC Transporter Permease Protein; ABC-2 Type Transport System Permease Protein; ABC-2 Type Transport System Permease; Abc Transporter Permease Protein; ABC-2 Type Transporter Permease; Permease Protein Of ABC Transporter; ABC Transporter Family Protein

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MLIIISNIIAIYRKELQGYFASPLAYTITGIFWLLGGYFLVAILLGPDGIIQQIATRDQLGITEPPVDAPYEFLKAYLGI
MGSLSLFLLPMLSMSLYAEERKRGTLELLATSPLTNWTVATGKLLAVLTFYISMVLPLLGLEAIALNAAKPPISPLLLLS
GHGGLILLAAAVLSLGMFVSSLTDSAILSAILTFALVLFLWVIDVVANAVSGPFAQALKHLSMLTHYTNIIQGLVDTGSI
IMLLSYVVLGVFLTAQSIDALRFQRS

Sequences:

>Translated_266_residues
MLIIISNIIAIYRKELQGYFASPLAYTITGIFWLLGGYFLVAILLGPDGIIQQIATRDQLGITEPPVDAPYEFLKAYLGI
MGSLSLFLLPMLSMSLYAEERKRGTLELLATSPLTNWTVATGKLLAVLTFYISMVLPLLGLEAIALNAAKPPISPLLLLS
GHGGLILLAAAVLSLGMFVSSLTDSAILSAILTFALVLFLWVIDVVANAVSGPFAQALKHLSMLTHYTNIIQGLVDTGSI
IMLLSYVVLGVFLTAQSIDALRFQRS
>Mature_266_residues
MLIIISNIIAIYRKELQGYFASPLAYTITGIFWLLGGYFLVAILLGPDGIIQQIATRDQLGITEPPVDAPYEFLKAYLGI
MGSLSLFLLPMLSMSLYAEERKRGTLELLATSPLTNWTVATGKLLAVLTFYISMVLPLLGLEAIALNAAKPPISPLLLLS
GHGGLILLAAAVLSLGMFVSSLTDSAILSAILTFALVLFLWVIDVVANAVSGPFAQALKHLSMLTHYTNIIQGLVDTGSI
IMLLSYVVLGVFLTAQSIDALRFQRS

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28645; Mature: 28645

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIIISNIIAIYRKELQGYFASPLAYTITGIFWLLGGYFLVAILLGPDGIIQQIATRDQL
CEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
GITEPPVDAPYEFLKAYLGIMGSLSLFLLPMLSMSLYAEERKRGTLELLATSPLTNWTVA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCHHH
TGKLLAVLTFYISMVLPLLGLEAIALNAAKPPISPLLLLSGHGGLILLAAAVLSLGMFVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
SLTDSAILSAILTFALVLFLWVIDVVANAVSGPFAQALKHLSMLTHYTNIIQGLVDTGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IMLLSYVVLGVFLTAQSIDALRFQRS
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIIISNIIAIYRKELQGYFASPLAYTITGIFWLLGGYFLVAILLGPDGIIQQIATRDQL
CEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
GITEPPVDAPYEFLKAYLGIMGSLSLFLLPMLSMSLYAEERKRGTLELLATSPLTNWTVA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCHHH
TGKLLAVLTFYISMVLPLLGLEAIALNAAKPPISPLLLLSGHGGLILLAAAVLSLGMFVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
SLTDSAILSAILTFALVLFLWVIDVVANAVSGPFAQALKHLSMLTHYTNIIQGLVDTGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IMLLSYVVLGVFLTAQSIDALRFQRS
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA