Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475991

Identifier: 113475991

GI number: 113475991

Start: 3644581

End: 3646008

Strand: Direct

Name: 113475991

Synonym: Tery_2359

Alternate gene names: NA

Gene position: 3644581-3646008 (Clockwise)

Preceding gene: 113475990

Following gene: 113475992

Centisome position: 47.03

GC content: 41.04

Gene sequence:

>1428_bases
ATGACATCCTCTCTATTCACTCTATCCCTAACTTCATTAGTCACCCTGATCCATGAAGATGACAATATCATATTACAAGC
TCCCATCCGCAGTCCACTCAAAAAAACTACTCCAACTCGCCAAGTCAAATTTGAACATCCCTCCTCAGGTTTAATATCGG
CATTAAATCATCTCAAGTCTTCCCAGAAAACCTACCCTCAACTTAAAGCATTAGTGGTAGCTGCTGATGGCGAGGAAGCG
GGAGAAAGATTTGATGTAGAATTGGAAAAACTCATAAATACAGGTTGGGTTTCCCATTCCCTTTACCCCCTGGCAACAGT
TATCCCAATAGTGGAAAAAAACTATCGCTTTAAGTCTCCAGAAATTGCACAACTACAAGGAAAATTTACCTTGTCCCGTT
TTGCCTATTTACACCAAAGCCAAGGGAAAACCATCATAGAATGTCCCCTGTCTACTAGTCAAATAATTGCATTAGACTGG
CGATGTGGTGCCTTGCTTGCCAAATTATCTCAACCACAAACCCCTAGCAGTTTGAGCGCAGATATTCCCGATATTACTGA
AGAAATTGCCCAAAAATTCCTGGCTTTGTTGATGGCAACTCAAATGTTATCCCCAGAAACCGAACCCACCCCGCTGATGT
ATTGGGAATTTCACGACTTGCTATTTCACAGTCGCTCTCGGATAGGAAGACACAACAACCCAACTGGAGGCACAATGAGA
TTTTTTGGCAAAACTGAACCTTTGCCTATTGTCAAACCACCAATGAGTGACAAAGTTATTAAACTGGTGCAACCTAACTT
AGAATATTTGACTCAAATTGACATTCCCTTGACAAAAGCATTGGAGTTACGCCAGTCTATTCGGGAGTACGATGAACAAC
CAATACGGTTGCAACAATTGGGAAAATTGTTATATTGTTGCGCTAGGATTAAAAAAATAGAGACTATGGAAACAGAGGAA
TTCGGTACACTGCATTTAAACTATCGTCCTTATCCTTGTGGCGGTGCAATTTATGAGTTGGAAATTTATCCAGTGGTGAA
CCGTTGTCAAGGTTTGGCAGCAGGGGTCTATCACTATCAACCTTTGGAGCATTGTCTGTATCAAATTTCGGCTCATGAAA
CACAAGTGGAGGCATTGATAGAGGATGCTTACAAGTCTAGTGGTGAACAAGATCAACCTCAAGTTTTGTTGGTAATAACA
GCTAGGTTTGGGCGAATATTTTGGAAGTATGAATCAATTGCTTATGCTTTGATATTGAAGCACGTTGGTGTATTGTATCA
AACTTTTTATTTAATGGCAACGGGGATGCACTTAGCTCCCTGTGCTTTGGGGATAGGAGATGCTGATAATTTTGCTCAGA
TAACAGGGTTAGATTATTATGAAGAGTCTTCTGTTGGGGAGTTTCTTTTGGGTTCGGTGAGGAACTAG

Upstream 100 bases:

>100_bases
CCCGTGGGGTAGTAATGAAAAAAGTAATTAATATAGACAACTTTTGCAACTTTATAAGTTAAAAATTAAAAAAAATTAAA
AGTTAAAAGTTAAAACTCAA

Downstream 100 bases:

>100_bases
TTATTACGGCGCTACCCCGTTTTTTCGGTAAAAATTTAGTTTCCGGAGATATCTAATAAGAATGTAGAGCACCGAATATA
TGGAGAGTTATTTTCTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NAD(P)H-Flavin Oxidoreductase; SagB-Type Dehydrogenase Domain-Containing Protein; NADH Oxidase; SagB-Type Dehydrogenase Domain Protein; Oxidoreductase; SagB-Type Dehydrogenase Domain; Streptolysin Associated Protein SagB; Goadsporin Biosynthetic Protein; Nitroreductase Family Protein

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MTSSLFTLSLTSLVTLIHEDDNIILQAPIRSPLKKTTPTRQVKFEHPSSGLISALNHLKSSQKTYPQLKALVVAADGEEA
GERFDVELEKLINTGWVSHSLYPLATVIPIVEKNYRFKSPEIAQLQGKFTLSRFAYLHQSQGKTIIECPLSTSQIIALDW
RCGALLAKLSQPQTPSSLSADIPDITEEIAQKFLALLMATQMLSPETEPTPLMYWEFHDLLFHSRSRIGRHNNPTGGTMR
FFGKTEPLPIVKPPMSDKVIKLVQPNLEYLTQIDIPLTKALELRQSIREYDEQPIRLQQLGKLLYCCARIKKIETMETEE
FGTLHLNYRPYPCGGAIYELEIYPVVNRCQGLAAGVYHYQPLEHCLYQISAHETQVEALIEDAYKSSGEQDQPQVLLVIT
ARFGRIFWKYESIAYALILKHVGVLYQTFYLMATGMHLAPCALGIGDADNFAQITGLDYYEESSVGEFLLGSVRN

Sequences:

>Translated_475_residues
MTSSLFTLSLTSLVTLIHEDDNIILQAPIRSPLKKTTPTRQVKFEHPSSGLISALNHLKSSQKTYPQLKALVVAADGEEA
GERFDVELEKLINTGWVSHSLYPLATVIPIVEKNYRFKSPEIAQLQGKFTLSRFAYLHQSQGKTIIECPLSTSQIIALDW
RCGALLAKLSQPQTPSSLSADIPDITEEIAQKFLALLMATQMLSPETEPTPLMYWEFHDLLFHSRSRIGRHNNPTGGTMR
FFGKTEPLPIVKPPMSDKVIKLVQPNLEYLTQIDIPLTKALELRQSIREYDEQPIRLQQLGKLLYCCARIKKIETMETEE
FGTLHLNYRPYPCGGAIYELEIYPVVNRCQGLAAGVYHYQPLEHCLYQISAHETQVEALIEDAYKSSGEQDQPQVLLVIT
ARFGRIFWKYESIAYALILKHVGVLYQTFYLMATGMHLAPCALGIGDADNFAQITGLDYYEESSVGEFLLGSVRN
>Mature_474_residues
TSSLFTLSLTSLVTLIHEDDNIILQAPIRSPLKKTTPTRQVKFEHPSSGLISALNHLKSSQKTYPQLKALVVAADGEEAG
ERFDVELEKLINTGWVSHSLYPLATVIPIVEKNYRFKSPEIAQLQGKFTLSRFAYLHQSQGKTIIECPLSTSQIIALDWR
CGALLAKLSQPQTPSSLSADIPDITEEIAQKFLALLMATQMLSPETEPTPLMYWEFHDLLFHSRSRIGRHNNPTGGTMRF
FGKTEPLPIVKPPMSDKVIKLVQPNLEYLTQIDIPLTKALELRQSIREYDEQPIRLQQLGKLLYCCARIKKIETMETEEF
GTLHLNYRPYPCGGAIYELEIYPVVNRCQGLAAGVYHYQPLEHCLYQISAHETQVEALIEDAYKSSGEQDQPQVLLVITA
RFGRIFWKYESIAYALILKHVGVLYQTFYLMATGMHLAPCALGIGDADNFAQITGLDYYEESSVGEFLLGSVRN

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53555; Mature: 53424

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSLFTLSLTSLVTLIHEDDNIILQAPIRSPLKKTTPTRQVKFEHPSSGLISALNHLKS
CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHH
SQKTYPQLKALVVAADGEEAGERFDVELEKLINTGWVSHSLYPLATVIPIVEKNYRFKSP
HHHHCCCEEEEEEEECCHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
EIAQLQGKFTLSRFAYLHQSQGKTIIECPLSTSQIIALDWRCGALLAKLSQPQTPSSLSA
CHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC
DIPDITEEIAQKFLALLMATQMLSPETEPTPLMYWEFHDLLFHSRSRIGRHNNPTGGTMR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEE
FFGKTEPLPIVKPPMSDKVIKLVQPNLEYLTQIDIPLTKALELRQSIREYDEQPIRLQQL
ECCCCCCCCCCCCCCCHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCHHHHHH
GKLLYCCARIKKIETMETEEFGTLHLNYRPYPCGGAIYELEIYPVVNRCQGLAAGVYHYQ
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEEEHHHHHCHHHHHHHHHH
PLEHCLYQISAHETQVEALIEDAYKSSGEQDQPQVLLVITARFGRIFWKYESIAYALILK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH
HVGVLYQTFYLMATGMHLAPCALGIGDADNFAQITGLDYYEESSVGEFLLGSVRN
HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
TSSLFTLSLTSLVTLIHEDDNIILQAPIRSPLKKTTPTRQVKFEHPSSGLISALNHLKS
CCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHH
SQKTYPQLKALVVAADGEEAGERFDVELEKLINTGWVSHSLYPLATVIPIVEKNYRFKSP
HHHHCCCEEEEEEEECCHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
EIAQLQGKFTLSRFAYLHQSQGKTIIECPLSTSQIIALDWRCGALLAKLSQPQTPSSLSA
CHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC
DIPDITEEIAQKFLALLMATQMLSPETEPTPLMYWEFHDLLFHSRSRIGRHNNPTGGTMR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEE
FFGKTEPLPIVKPPMSDKVIKLVQPNLEYLTQIDIPLTKALELRQSIREYDEQPIRLQQL
ECCCCCCCCCCCCCCCHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCHHHHHH
GKLLYCCARIKKIETMETEEFGTLHLNYRPYPCGGAIYELEIYPVVNRCQGLAAGVYHYQ
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEEEHHHHHCHHHHHHHHHH
PLEHCLYQISAHETQVEALIEDAYKSSGEQDQPQVLLVITARFGRIFWKYESIAYALILK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH
HVGVLYQTFYLMATGMHLAPCALGIGDADNFAQITGLDYYEESSVGEFLLGSVRN
HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA