| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475960
Identifier: 113475960
GI number: 113475960
Start: 3600515
End: 3601087
Strand: Direct
Name: 113475960
Synonym: Tery_2326
Alternate gene names: NA
Gene position: 3600515-3601087 (Clockwise)
Preceding gene: 113475959
Following gene: 113475961
Centisome position: 46.46
GC content: 37.17
Gene sequence:
>573_bases ATGGCTCTTATAGATATATGGGAAAAAAGCACTGAAATTAGGAAAGATGAGGTGCTACAGATTCACGAGACAGGTAAAGA AGAGAAGAAGCAAAGGCAAGATGTCATTGTTCAAAGGCAAAATGAGGTGCAAGTTATTCATAATGAAGCTTTAGAAGAGA AGAATCAAAGGCAAGACGTCATTGTTAAAAGGCAAAATGAGGTGCAAGTTATTCATAATGAAGCTTTAGAAGAGAAGAAG CAAAGGCAAGATGTCATTGTTGAAAGGCAAAATGATACAAAAGCTGATCATGAAAAAGCTGTAGCAGATAAGTCCCAAAG GCAAGACGTCATTGTTCAAAGGCAAAATGATACGAAAGCTGATCATGAAAAAGCTGTAGCAGATAAGTCCCAAAGGCAAG ATGTCATTGTTGAAAGGCAAAATGATACGAAAGCTGATCATGAAAAAGCTCTAGCTGACAAGAAGCAAAGGCAAGATGAA AAGGATGAACGGAGATCCTACGTTTGGGGTTATAAAGCTGGAATTGAAACAAAACAAACGAGTAGTAATGATTCATATCA GCAAATAGCATAA
Upstream 100 bases:
>100_bases CTTAATTTTTTCAGTTGTACTTCCTTGATTTCTTTTACTAACTTTACTACTTTATTGTATCTGCTGCTGTTACTTAATTA ATAATAAGGCACAGGTTTTT
Downstream 100 bases:
>100_bases GCATCATGATCATTGGAATGAATTAATTAATATAGTTTAGTTAAGGATTTCCTTTGACAGGTAGTTAAGAGCACAAAGTG TGGAAAAAGTAATTAAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MALIDIWEKSTEIRKDEVLQIHETGKEEKKQRQDVIVQRQNEVQVIHNEALEEKNQRQDVIVKRQNEVQVIHNEALEEKK QRQDVIVERQNDTKADHEKAVADKSQRQDVIVQRQNDTKADHEKAVADKSQRQDVIVERQNDTKADHEKALADKKQRQDE KDERRSYVWGYKAGIETKQTSSNDSYQQIA
Sequences:
>Translated_190_residues MALIDIWEKSTEIRKDEVLQIHETGKEEKKQRQDVIVQRQNEVQVIHNEALEEKNQRQDVIVKRQNEVQVIHNEALEEKK QRQDVIVERQNDTKADHEKAVADKSQRQDVIVQRQNDTKADHEKAVADKSQRQDVIVERQNDTKADHEKALADKKQRQDE KDERRSYVWGYKAGIETKQTSSNDSYQQIA >Mature_189_residues ALIDIWEKSTEIRKDEVLQIHETGKEEKKQRQDVIVQRQNEVQVIHNEALEEKNQRQDVIVKRQNEVQVIHNEALEEKKQ RQDVIVERQNDTKADHEKAVADKSQRQDVIVQRQNDTKADHEKAVADKSQRQDVIVERQNDTKADHEKALADKKQRQDEK DERRSYVWGYKAGIETKQTSSNDSYQQIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22403; Mature: 22272
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIDIWEKSTEIRKDEVLQIHETGKEEKKQRQDVIVQRQNEVQVIHNEALEEKNQRQDV CCEECCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH IVKRQNEVQVIHNEALEEKKQRQDVIVERQNDTKADHEKAVADKSQRQDVIVQRQNDTKA EEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCH DHEKAVADKSQRQDVIVERQNDTKADHEKALADKKQRQDEKDERRSYVWGYKAGIETKQT HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC SSNDSYQQIA CCCCCHHHCC >Mature Secondary Structure ALIDIWEKSTEIRKDEVLQIHETGKEEKKQRQDVIVQRQNEVQVIHNEALEEKNQRQDV CEECCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH IVKRQNEVQVIHNEALEEKKQRQDVIVERQNDTKADHEKAVADKSQRQDVIVQRQNDTKA EEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCH DHEKAVADKSQRQDVIVERQNDTKADHEKALADKKQRQDEKDERRSYVWGYKAGIETKQT HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC SSNDSYQQIA CCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA