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The map label for this gene is 113475948

Identifier: 113475948

GI number: 113475948

Start: 3583508

End: 3583900

Strand: Direct

Name: 113475948

Synonym: Tery_2312

Alternate gene names: NA

Gene position: 3583508-3583900 (Clockwise)

Preceding gene: 113475947

Following gene: 113475949

Centisome position: 46.24

GC content: 38.17

Gene sequence:

>393_bases
TTGCAGCAGTTAAACCCTATCATCCTAACGTCAGCAGAAGTTCAGAAAATTTCACCGTCAGCTTGGGCCTATTTGGGAGA
TGCAGTTTACGAACTGTATATTCGGAATTACTATTTGATACCACCAAAGCGGTCGGGTTATTATCATCAATTAGTTGTGT
CCCAAGTCAGGGCAGAAAGTCAAGCTCATCAATTACATAACTTAAAACCTCACCTCACTGATGTAGAGTTAGATATTCTC
AAGCGAGGACGGAATGCTGCTTTTAGGAAACCAAAAAGATTAGATCCAGAGGTTTATCAACAGGCTACAAGTCTAGAAAC
TTTAATTGGGTACCTATATTTGACCGATCCACAAAGATTAAATCAACTACTAAGCTATATAGAATTAGATTAA

Upstream 100 bases:

>100_bases
CTCCTGGTTGAAAAATAAAGCAAGCATTTTTCACTGGCATAATTGGATATTTCCGAATTTTGCCGTAATTGTTTAAGTTT
TATATAGTAAAATAATTACT

Downstream 100 bases:

>100_bases
AGTCAAAAGTCAGGTTAATATATATTTTTATTATTTTTAGAGTATGGCCAACTAACAATAATGGCTTTAATTGCTAGAGT
TTTGAGTAGATAAGGTATTT

Product: ribonuclease III

Products: NA

Alternate protein names: URF4 [H]

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQQLNPIILTSAEVQKISPSAWAYLGDAVYELYIRNYYLIPPKRSGYYHQLVVSQVRAESQAHQLHNLKPHLTDVELDIL
KRGRNAAFRKPKRLDPEVYQQATSLETLIGYLYLTDPQRLNQLLSYIELD

Sequences:

>Translated_130_residues
MQQLNPIILTSAEVQKISPSAWAYLGDAVYELYIRNYYLIPPKRSGYYHQLVVSQVRAESQAHQLHNLKPHLTDVELDIL
KRGRNAAFRKPKRLDPEVYQQATSLETLIGYLYLTDPQRLNQLLSYIELD
>Mature_130_residues
MQQLNPIILTSAEVQKISPSAWAYLGDAVYELYIRNYYLIPPKRSGYYHQLVVSQVRAESQAHQLHNLKPHLTDVELDIL
KRGRNAAFRKPKRLDPEVYQQATSLETLIGYLYLTDPQRLNQLLSYIELD

Specific function: Unknown

COG id: COG1939

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000999
- InterPro:   IPR008226 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15129; Mature: 15129

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLNPIILTSAEVQKISPSAWAYLGDAVYELYIRNYYLIPPKRSGYYHQLVVSQVRAES
CCCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHH
QAHQLHNLKPHLTDVELDILKRGRNAAFRKPKRLDPEVYQQATSLETLIGYLYLTDPQRL
HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
NQLLSYIELD
HHHHHHHCCC
>Mature Secondary Structure
MQQLNPIILTSAEVQKISPSAWAYLGDAVYELYIRNYYLIPPKRSGYYHQLVVSQVRAES
CCCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHH
QAHQLHNLKPHLTDVELDILKRGRNAAFRKPKRLDPEVYQQATSLETLIGYLYLTDPQRL
HHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
NQLLSYIELD
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8363578 [H]