Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is sglT [H]

Identifier: 113475925

GI number: 113475925

Start: 3557804

End: 3559585

Strand: Direct

Name: sglT [H]

Synonym: Tery_2288

Alternate gene names: 113475925

Gene position: 3557804-3559585 (Clockwise)

Preceding gene: 113475924

Following gene: 113475926

Centisome position: 45.91

GC content: 32.77

Gene sequence:

>1782_bases
ATGGAAAAAATTGATTATATAATTGTTACAATTTATCTGTTATTTATAGTAATCTTTGGATTTTTTATACAAAGAAAAGC
ATCGACAGGAATAGAGTCTTACTTTCTCGGAAATCGTAATCTTCCTTGGTGGATTTTGGGTGCTTCTGGTATGGCTTCTA
ATACTGATTTAGCTGGTACTATGCTATTAACTTCTTTAGTCTATTCTCTGGGAACTAAGGGCTTTTTTATTGAAATTCGG
GGTGGAGTTGTATTAATTATGGCGTTCCTAATGACGTTTATGGGAAAGTGGAATCGTCGGGCTCAAGTAATGACTATTGC
AGAATGGATGGAGTTACGTTTTGGTAAGAATAGGGAAGGAAATATAGCCAGAATTATTAGTGCGGTTGCTAATATTATTT
TTGCTATTGGTACCATGAGTTATTTTGCTCTTGGAGGAGGAAAATTTTTAGGAGGATTTTTAGGTATTGATGATAGAGTT
GCTGGAATATTGCTGATTTTATTGGCTCTTATCTATACAGCTGTAAGTGGATTTTATGGGGTTGTTTTGACAGATGTTTT
CCAGGGAATTTTGATTTTTGTTGCAATTATATATATCTGTTTTCTGGCTTTTCAAATAGTAAACTTACCAGAGAATTTTG
TGGTTTCAATTCCAGGTACGGAACAATTACAAGAATTGAGTTTGAGAGAATGGAGCAGTCTTTTTCCACCAATTAAAATT
GACTTACCAGGAGATTATAGTATTTTTAATTTGTTTGGTGGCGTGATGTTATTTTATGTTTTTAAAGTATTTCTAGAAGG
CGGTGCTGGAGGAGGTGGTTATATGATTCAACGTTACTTCGCTGCTAAGAATGATCGGGAAGCTGGTTTACTTTCTTTAT
TCTGGATTTTTTTACTATCTTTTCGCTGGCCTTTGGTTACATCTTTGGCAATATTAGGAATAGATTATGGTTTGAAAAAT
CAGATAATTTCTGACCCAGAATTAGTCTTGCCTACTGTAATTTCTGAATATATTCCAGCGGGAGTTAAAGGTTTATTGGT
TGCCTGTTTTATTGCTGCTGCAATGTCAACTTTTGATTCGATAATTAATGCTAGTGCTGCCTATTGGGTAAAGGATATTT
ATCAAGCTTATATTAAACCTGAAGCTAATAATCAACAATTGGTTAATCAAGGTCGTTTAGCTTCGGTTGTTATTGTTAGT
TTGGGATTAATTTTTAGTTTTAATATTACGAATATTAATGATATTTGGGGATGGTTAACTTTAGGGTTAGGAACTGGGTT
GTTTATTCCTTTAGTATTGAGATGGTATTGGTGGCGATTTAATGGTTATGGATTTGCCATTGGTACTGGTGCAGGTTTAG
TTGGAGCTATTTTGACAAAAGCAGTTATTTTACCTTTTTTGAATCTGCCTCAACTTCAAGAATATATTCTGTTTTTAGTT
CCAAGTATTTGTTCTTTTTTAGGATGTATTTTAGGAACATTGTTAACTCCATCAACTAATTTGGAAGTGATTGATAATTT
TTATCGGGTAACTCGACCTTTTGGTTTTTGGGGAGTAGTTAGTAAGAATTTACCAACCAATATTCAAGCAAAAATTAAAA
GAGAAAATCGACGAGATATTCTGGCAACATTTATTGCAATTCCTTGGCAGTTGGTTTTATTTTTAATGGGAATAATTTTA
ATGATGAAACAGTGGGATAGTTTTGGTATTTTATTATTAATGTTTATTTTGTTGTCGATAGGATTATATTTTACTTGGTT
TAAGCATCTAGAAAAAATATAG

Upstream 100 bases:

>100_bases
TTTAGAGGTAGAGGTTTAAATCTCATTCTTACACATCAAAAAAAATGAACTCAATACTTAAATTTTGAAGGCTAATTTTT
TTTGATTTAGAGATATTTTT

Downstream 100 bases:

>100_bases
AAATCAAAAATAATTTTTTGAGAATAATTAAATAGGGTTTGTCGAAAAAAAAACTGAAAGTATTTACAAATGAAGCTTTA
GCTTTTTTTGTCTGAAAAAG

Product: Na+/solute symporter

Products: NA

Alternate protein names: Na(+)/glucose symporter [H]

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MEKIDYIIVTIYLLFIVIFGFFIQRKASTGIESYFLGNRNLPWWILGASGMASNTDLAGTMLLTSLVYSLGTKGFFIEIR
GGVVLIMAFLMTFMGKWNRRAQVMTIAEWMELRFGKNREGNIARIISAVANIIFAIGTMSYFALGGGKFLGGFLGIDDRV
AGILLILLALIYTAVSGFYGVVLTDVFQGILIFVAIIYICFLAFQIVNLPENFVVSIPGTEQLQELSLREWSSLFPPIKI
DLPGDYSIFNLFGGVMLFYVFKVFLEGGAGGGGYMIQRYFAAKNDREAGLLSLFWIFLLSFRWPLVTSLAILGIDYGLKN
QIISDPELVLPTVISEYIPAGVKGLLVACFIAAAMSTFDSIINASAAYWVKDIYQAYIKPEANNQQLVNQGRLASVVIVS
LGLIFSFNITNINDIWGWLTLGLGTGLFIPLVLRWYWWRFNGYGFAIGTGAGLVGAILTKAVILPFLNLPQLQEYILFLV
PSICSFLGCILGTLLTPSTNLEVIDNFYRVTRPFGFWGVVSKNLPTNIQAKIKRENRRDILATFIAIPWQLVLFLMGIIL
MMKQWDSFGILLLMFILLSIGLYFTWFKHLEKI

Sequences:

>Translated_593_residues
MEKIDYIIVTIYLLFIVIFGFFIQRKASTGIESYFLGNRNLPWWILGASGMASNTDLAGTMLLTSLVYSLGTKGFFIEIR
GGVVLIMAFLMTFMGKWNRRAQVMTIAEWMELRFGKNREGNIARIISAVANIIFAIGTMSYFALGGGKFLGGFLGIDDRV
AGILLILLALIYTAVSGFYGVVLTDVFQGILIFVAIIYICFLAFQIVNLPENFVVSIPGTEQLQELSLREWSSLFPPIKI
DLPGDYSIFNLFGGVMLFYVFKVFLEGGAGGGGYMIQRYFAAKNDREAGLLSLFWIFLLSFRWPLVTSLAILGIDYGLKN
QIISDPELVLPTVISEYIPAGVKGLLVACFIAAAMSTFDSIINASAAYWVKDIYQAYIKPEANNQQLVNQGRLASVVIVS
LGLIFSFNITNINDIWGWLTLGLGTGLFIPLVLRWYWWRFNGYGFAIGTGAGLVGAILTKAVILPFLNLPQLQEYILFLV
PSICSFLGCILGTLLTPSTNLEVIDNFYRVTRPFGFWGVVSKNLPTNIQAKIKRENRRDILATFIAIPWQLVLFLMGIIL
MMKQWDSFGILLLMFILLSIGLYFTWFKHLEKI
>Mature_593_residues
MEKIDYIIVTIYLLFIVIFGFFIQRKASTGIESYFLGNRNLPWWILGASGMASNTDLAGTMLLTSLVYSLGTKGFFIEIR
GGVVLIMAFLMTFMGKWNRRAQVMTIAEWMELRFGKNREGNIARIISAVANIIFAIGTMSYFALGGGKFLGGFLGIDDRV
AGILLILLALIYTAVSGFYGVVLTDVFQGILIFVAIIYICFLAFQIVNLPENFVVSIPGTEQLQELSLREWSSLFPPIKI
DLPGDYSIFNLFGGVMLFYVFKVFLEGGAGGGGYMIQRYFAAKNDREAGLLSLFWIFLLSFRWPLVTSLAILGIDYGLKN
QIISDPELVLPTVISEYIPAGVKGLLVACFIAAAMSTFDSIINASAAYWVKDIYQAYIKPEANNQQLVNQGRLASVVIVS
LGLIFSFNITNINDIWGWLTLGLGTGLFIPLVLRWYWWRFNGYGFAIGTGAGLVGAILTKAVILPFLNLPQLQEYILFLV
PSICSFLGCILGTLLTPSTNLEVIDNFYRVTRPFGFWGVVSKNLPTNIQAKIKRENRRDILATFIAIPWQLVLFLMGIIL
MMKQWDSFGILLLMFILLSIGLYFTWFKHLEKI

Specific function: Actively transports glucose into cells by Na(+) cotransport [H]

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI17941285, Length=427, Percent_Identity=24.1217798594848, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI310128183, Length=444, Percent_Identity=24.5495495495495, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI14140236, Length=534, Percent_Identity=23.5955056179775, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI109659836, Length=594, Percent_Identity=22.3905723905724, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI110835708, Length=597, Percent_Identity=23.1155778894472, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI4507031, Length=489, Percent_Identity=22.6993865030675, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI206597483, Length=432, Percent_Identity=22.2222222222222, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI109659839, Length=601, Percent_Identity=22.1297836938436, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI206597487, Length=435, Percent_Identity=22.5287356321839, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI1790113, Length=396, Percent_Identity=25.2525252525253, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 66312; Mature: 66312

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIDYIIVTIYLLFIVIFGFFIQRKASTGIESYFLGNRNLPWWILGASGMASNTDLAGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCEEEEECCCCCCCCCHHHH
MLLTSLVYSLGTKGFFIEIRGGVVLIMAFLMTFMGKWNRRAQVMTIAEWMELRFGKNREG
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
NIARIISAVANIIFAIGTMSYFALGGGKFLGGFLGIDDRVAGILLILLALIYTAVSGFYG
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVLTDVFQGILIFVAIIYICFLAFQIVNLPENFVVSIPGTEQLQELSLREWSSLFPPIKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEE
DLPGDYSIFNLFGGVMLFYVFKVFLEGGAGGGGYMIQRYFAAKNDREAGLLSLFWIFLLS
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FRWPLVTSLAILGIDYGLKNQIISDPELVLPTVISEYIPAGVKGLLVACFIAAAMSTFDS
HHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IINASAAYWVKDIYQAYIKPEANNQQLVNQGRLASVVIVSLGLIFSFNITNINDIWGWLT
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHHHH
LGLGTGLFIPLVLRWYWWRFNGYGFAIGTGAGLVGAILTKAVILPFLNLPQLQEYILFLV
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
PSICSFLGCILGTLLTPSTNLEVIDNFYRVTRPFGFWGVVSKNLPTNIQAKIKRENRRDI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHH
LATFIAIPWQLVLFLMGIILMMKQWDSFGILLLMFILLSIGLYFTWFKHLEKI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKIDYIIVTIYLLFIVIFGFFIQRKASTGIESYFLGNRNLPWWILGASGMASNTDLAGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCEEEEECCCCCCCCCHHHH
MLLTSLVYSLGTKGFFIEIRGGVVLIMAFLMTFMGKWNRRAQVMTIAEWMELRFGKNREG
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
NIARIISAVANIIFAIGTMSYFALGGGKFLGGFLGIDDRVAGILLILLALIYTAVSGFYG
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVLTDVFQGILIFVAIIYICFLAFQIVNLPENFVVSIPGTEQLQELSLREWSSLFPPIKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEE
DLPGDYSIFNLFGGVMLFYVFKVFLEGGAGGGGYMIQRYFAAKNDREAGLLSLFWIFLLS
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
FRWPLVTSLAILGIDYGLKNQIISDPELVLPTVISEYIPAGVKGLLVACFIAAAMSTFDS
HHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IINASAAYWVKDIYQAYIKPEANNQQLVNQGRLASVVIVSLGLIFSFNITNINDIWGWLT
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHHHH
LGLGTGLFIPLVLRWYWWRFNGYGFAIGTGAGLVGAILTKAVILPFLNLPQLQEYILFLV
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
PSICSFLGCILGTLLTPSTNLEVIDNFYRVTRPFGFWGVVSKNLPTNIQAKIKRENRRDI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHH
LATFIAIPWQLVLFLMGIILMMKQWDSFGILLLMFILLSIGLYFTWFKHLEKI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8652595; 10835424; 10757971 [H]