| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is hisB
Identifier: 113475686
GI number: 113475686
Start: 3155435
End: 3156076
Strand: Direct
Name: hisB
Synonym: Tery_2028
Alternate gene names: 113475686
Gene position: 3155435-3156076 (Clockwise)
Preceding gene: 113475685
Following gene: 113475688
Centisome position: 40.71
GC content: 41.9
Gene sequence:
>642_bases ATGCAGATAAGCGATCGCCTTTCTTCATCTACTGCACCAATACTGAATTTGCCTGTTAGACGTGCTTCTGTGAAACGAAA AACTGGAGAAACTGATGTGACTGTTAATCTTAATCTTGATGGTGTGGGTAATTGTCAGGCTAATACTGGTATTCCTTTTT TGGATCATATGTTGCATCAAATTTCTTCTCATGGACTGATTGATTTGGATGTCCAGGCTGTGGGGGATATTGAAATTGAT GACCATCATACTAATGAGGATGTGGGCATTACTTTAGGCCAGGCTTTAAAGCAGGCCTTGGGCGATCGAAAGGGTATTGT CCGTTTTGGTCATTTTTTGGCTCCTTTGGATGAGGCTTTGGTTGAAGTGGCCTTAGATTTTTCTGGTCGTCCACATTTAA GTTATGGTTTGGAAATGCCAACTCAACGGGTGGGAAATTATGATACTCAGTTAGTACGGGAATTTTTTGTGGCCCTGGCC AATAATAGTTTGATGACTTTGCATATTCGGCAGTTGGGAGGAATTAATTCTCATCATATTATTGAGGCAGGGTTTAAAGC TTTTGCTCGTTCTCTACGGATGGCTACGGAAATTGACCCCAGGCGAGTTGGGGAAATTCCTAGTTCCAAAGGAGTTTTGT AG
Upstream 100 bases:
>100_bases CTTACTTGGCTTAGTTTAACAATAATGAATAAACAGGCTGTAAAACTGTGCTACTGAAAAAGTAAAATTTAAAATTTATA TCTATATTTATATATTTATT
Downstream 100 bases:
>100_bases TTAGTTATCAGTTTTTGACTTTAGCGATCGCCTATGAGAAATTATTTTATACCAATTTCCTAAAGTCCGACTACACATAA TGCTTCAAGAATAAAATCAT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQISDRLSSSTAPILNLPVRRASVKRKTGETDVTVNLNLDGVGNCQANTGIPFLDHMLHQISSHGLIDLDVQAVGDIEID DHHTNEDVGITLGQALKQALGDRKGIVRFGHFLAPLDEALVEVALDFSGRPHLSYGLEMPTQRVGNYDTQLVREFFVALA NNSLMTLHIRQLGGINSHHIIEAGFKAFARSLRMATEIDPRRVGEIPSSKGVL
Sequences:
>Translated_213_residues MQISDRLSSSTAPILNLPVRRASVKRKTGETDVTVNLNLDGVGNCQANTGIPFLDHMLHQISSHGLIDLDVQAVGDIEID DHHTNEDVGITLGQALKQALGDRKGIVRFGHFLAPLDEALVEVALDFSGRPHLSYGLEMPTQRVGNYDTQLVREFFVALA NNSLMTLHIRQLGGINSHHIIEAGFKAFARSLRMATEIDPRRVGEIPSSKGVL >Mature_213_residues MQISDRLSSSTAPILNLPVRRASVKRKTGETDVTVNLNLDGVGNCQANTGIPFLDHMLHQISSHGLIDLDVQAVGDIEID DHHTNEDVGITLGQALKQALGDRKGIVRFGHFLAPLDEALVEVALDFSGRPHLSYGLEMPTQRVGNYDTQLVREFFVALA NNSLMTLHIRQLGGINSHHIIEAGFKAFARSLRMATEIDPRRVGEIPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=48.9690721649485, Blast_Score=183, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=39.4495412844037, Blast_Score=153, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_TRIEI (Q93DQ9)
Other databases:
- EMBL: AF382392 - EMBL: CP000393 - RefSeq: YP_721747.1 - ProteinModelPortal: Q93DQ9 - SMR: Q93DQ9 - STRING: Q93DQ9 - GeneID: 4243632 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_2028 - NMPDR: fig|203124.1.peg.5429 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - PhylomeDB: Q93DQ9 - ProtClustDB: PRK00951 - BioCyc: TERY203124:TERY_2028-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 23291; Mature: 23291
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISDRLSSSTAPILNLPVRRASVKRKTGETDVTVNLNLDGVGNCQANTGIPFLDHMLHQ CCCHHHHCCCCCCEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH ISSHGLIDLDVQAVGDIEIDDHHTNEDVGITLGQALKQALGDRKGIVRFGHFLAPLDEAL HHCCCEEEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VEVALDFSGRPHLSYGLEMPTQRVGNYDTQLVREFFVALANNSLMTLHIRQLGGINSHHI HHHHHCCCCCCCCEECCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCHH IEAGFKAFARSLRMATEIDPRRVGEIPSSKGVL HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC >Mature Secondary Structure MQISDRLSSSTAPILNLPVRRASVKRKTGETDVTVNLNLDGVGNCQANTGIPFLDHMLHQ CCCHHHHCCCCCCEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH ISSHGLIDLDVQAVGDIEIDDHHTNEDVGITLGQALKQALGDRKGIVRFGHFLAPLDEAL HHCCCEEEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VEVALDFSGRPHLSYGLEMPTQRVGNYDTQLVREFFVALANNSLMTLHIRQLGGINSHHI HHHHHCCCCCCCCEECCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCHH IEAGFKAFARSLRMATEIDPRRVGEIPSSKGVL HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA