Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475670

Identifier: 113475670

GI number: 113475670

Start: 3131900

End: 3132613

Strand: Direct

Name: 113475670

Synonym: Tery_2010

Alternate gene names: NA

Gene position: 3131900-3132613 (Clockwise)

Preceding gene: 113475668

Following gene: 113475671

Centisome position: 40.41

GC content: 40.62

Gene sequence:

>714_bases
ATGTTTAATGATTCCTTCACCCCTAGCCATTTGATTATCTTAGGTTTACTGCTAAGTTTCGCGATCGCTCATAGTGGTTT
AGCAGCCCTCCGTTCCTGGGCAGAAAACAAAATTGGTCCTAGACTCTACCGCATTTTATTTGCCCTAGTGAGTCTACCAT
TAGCAGTAATTCTGATTATTTATTTTTTCAATCACCGTTACGATGGCTTACAGTTATGGCAACTGCAAGGCGTCCCAATT
GTTAAACCTATAGTTTGGACATTCTCAGCAATTTCATTCCTTTTCCTCTATCCCTCTACATTTAATCTACTAGAAATTGC
AGCAATTCAAAAACCACAAGTACATCTTCATGAAACAGGGATTATTCGCATTACGCGCCATCCTCAAATGGTAGGCCAAG
TAATCTGGTGTATTGCCCACACCCTTTGGCTAGGAACAAGCTTTACTTTTGTGACATCAGTTGGCCTAATACTCCATCAT
TTGTTTGGTGTTTGGCATGGCGATCGCCGACTTCAAAAGCGTTTTGGTGAATCTTATGACCAATTAAAGTCCCGAACATC
AGTTATTCCTTTTCTTGCCATTATCCAAGGACGTCAAACTTTACATTTACAGGAGTTTATCAGATGGGCTTACCTTGGAA
TAGGACTTTTTGTCCTTTTATTCTGGCAAGCTCATCCTTTACTAATCCGTGCAACTGGGAACATAGACTGGTAG

Upstream 100 bases:

>100_bases
GACTTGGGCATTCAAGGGATAAAGAGTTTATGTCCCTCTAGCATACTGCTCGAAGATTCATCCAAAAGTTAACTTTTATT
ATCAATTTCCTCTAGTAGCC

Downstream 100 bases:

>100_bases
CATAATCCCAGGATATAAAAAATTTAATTTAAATAGATTTAAACATGATGATTTTGTCAGTTAACGAAAAGACTTTTAAA
AAAGAGGTTTTGGAATCTTC

Product: NnrU

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MFNDSFTPSHLIILGLLLSFAIAHSGLAALRSWAENKIGPRLYRILFALVSLPLAVILIIYFFNHRYDGLQLWQLQGVPI
VKPIVWTFSAISFLFLYPSTFNLLEIAAIQKPQVHLHETGIIRITRHPQMVGQVIWCIAHTLWLGTSFTFVTSVGLILHH
LFGVWHGDRRLQKRFGESYDQLKSRTSVIPFLAIIQGRQTLHLQEFIRWAYLGIGLFVLLFWQAHPLLIRATGNIDW

Sequences:

>Translated_237_residues
MFNDSFTPSHLIILGLLLSFAIAHSGLAALRSWAENKIGPRLYRILFALVSLPLAVILIIYFFNHRYDGLQLWQLQGVPI
VKPIVWTFSAISFLFLYPSTFNLLEIAAIQKPQVHLHETGIIRITRHPQMVGQVIWCIAHTLWLGTSFTFVTSVGLILHH
LFGVWHGDRRLQKRFGESYDQLKSRTSVIPFLAIIQGRQTLHLQEFIRWAYLGIGLFVLLFWQAHPLLIRATGNIDW
>Mature_237_residues
MFNDSFTPSHLIILGLLLSFAIAHSGLAALRSWAENKIGPRLYRILFALVSLPLAVILIIYFFNHRYDGLQLWQLQGVPI
VKPIVWTFSAISFLFLYPSTFNLLEIAAIQKPQVHLHETGIIRITRHPQMVGQVIWCIAHTLWLGTSFTFVTSVGLILHH
LFGVWHGDRRLQKRFGESYDQLKSRTSVIPFLAIIQGRQTLHLQEFIRWAYLGIGLFVLLFWQAHPLLIRATGNIDW

Specific function: Unknown

COG id: COG4094

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27263; Mature: 27263

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNDSFTPSHLIILGLLLSFAIAHSGLAALRSWAENKIGPRLYRILFALVSLPLAVILII
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YFFNHRYDGLQLWQLQGVPIVKPIVWTFSAISFLFLYPSTFNLLEIAAIQKPQVHLHETG
HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCC
IIRITRHPQMVGQVIWCIAHTLWLGTSFTFVTSVGLILHHLFGVWHGDRRLQKRFGESYD
EEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH
QLKSRTSVIPFLAIIQGRQTLHLQEFIRWAYLGIGLFVLLFWQAHPLLIRATGNIDW
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
>Mature Secondary Structure
MFNDSFTPSHLIILGLLLSFAIAHSGLAALRSWAENKIGPRLYRILFALVSLPLAVILII
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YFFNHRYDGLQLWQLQGVPIVKPIVWTFSAISFLFLYPSTFNLLEIAAIQKPQVHLHETG
HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCC
IIRITRHPQMVGQVIWCIAHTLWLGTSFTFVTSVGLILHHLFGVWHGDRRLQKRFGESYD
EEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH
QLKSRTSVIPFLAIIQGRQTLHLQEFIRWAYLGIGLFVLLFWQAHPLLIRATGNIDW
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA