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The map label for this gene is 113475663

Identifier: 113475663

GI number: 113475663

Start: 3118977

End: 3119423

Strand: Direct

Name: 113475663

Synonym: Tery_2002

Alternate gene names: NA

Gene position: 3118977-3119423 (Clockwise)

Preceding gene: 113475662

Following gene: 113475664

Centisome position: 40.24

GC content: 36.69

Gene sequence:

>447_bases
ATGATGATGACTAATAAATTCATTAAGATAGGTGCAGCAGCAGAACTATTAGGAGTGTCCATTGATACGCTCCGAAAATG
GGAATTATCTGGAGAGCTGATACCAGACCGAAAAAGTCAAGCTGGAACTAGATTCTATGATTCCTCTAAACTTATCAATT
TAGGAGATGGAGACAGTCCTACTATTTGTTATGCTAGAGTCAGTAGTCACGACCAAAAAGTAGATTTAGAAAGGCAACAG
GCAATGCTAGAAACTTATTGTGCTGCCAAAGGGTGGATCTTTGAGGTAATTAAAGACTTAGGCTCTGGCATGAACTATCG
CAAAAAGGGATTGCAAAAACTATTAGAAAAAATCTTAAGAAAGCAAACTAAGGGATTAGTATTAACCCATAAAGATAAAT
TGTTAAGGTTTGGTGCTGAATTAGTCTTTTCTTTTTGCGAACTCTAG

Upstream 100 bases:

>100_bases
ATTCGGTATTTCCGGAGTTACTAATATGTACAAGGGTAAATAACAGCTTGAAAAAAATCTATGATTATCTTTTATAATCT
ATGATTGTCTTGTAAAACTT

Downstream 100 bases:

>100_bases
GGAATTGAGATAGTTATTATTAACAAAGGTGAACAACCAAGTTTTGAAGAAGAACTAGCTCAAGATGTACTAGAAATAAT
CACAGTTTTTTCAGCTAGGC

Product: regulatory protein, MerR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MMMTNKFIKIGAAAELLGVSIDTLRKWELSGELIPDRKSQAGTRFYDSSKLINLGDGDSPTICYARVSSHDQKVDLERQQ
AMLETYCAAKGWIFEVIKDLGSGMNYRKKGLQKLLEKILRKQTKGLVLTHKDKLLRFGAELVFSFCEL

Sequences:

>Translated_148_residues
MMMTNKFIKIGAAAELLGVSIDTLRKWELSGELIPDRKSQAGTRFYDSSKLINLGDGDSPTICYARVSSHDQKVDLERQQ
AMLETYCAAKGWIFEVIKDLGSGMNYRKKGLQKLLEKILRKQTKGLVLTHKDKLLRFGAELVFSFCEL
>Mature_148_residues
MMMTNKFIKIGAAAELLGVSIDTLRKWELSGELIPDRKSQAGTRFYDSSKLINLGDGDSPTICYARVSSHDQKVDLERQQ
AMLETYCAAKGWIFEVIKDLGSGMNYRKKGLQKLLEKILRKQTKGLVLTHKDKLLRFGAELVFSFCEL

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 16749; Mature: 16749

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMTNKFIKIGAAAELLGVSIDTLRKWELSGELIPDRKSQAGTRFYDSSKLINLGDGDSP
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCC
TICYARVSSHDQKVDLERQQAMLETYCAAKGWIFEVIKDLGSGMNYRKKGLQKLLEKILR
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KQTKGLVLTHKDKLLRFGAELVFSFCEL
HHHCCEEEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMMTNKFIKIGAAAELLGVSIDTLRKWELSGELIPDRKSQAGTRFYDSSKLINLGDGDSP
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCC
TICYARVSSHDQKVDLERQQAMLETYCAAKGWIFEVIKDLGSGMNYRKKGLQKLLEKILR
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KQTKGLVLTHKDKLLRFGAELVFSFCEL
HHHCCEEEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]