| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475605
Identifier: 113475605
GI number: 113475605
Start: 3004467
End: 3004748
Strand: Direct
Name: 113475605
Synonym: Tery_1938
Alternate gene names: NA
Gene position: 3004467-3004748 (Clockwise)
Preceding gene: 113475604
Following gene: 113475608
Centisome position: 38.77
GC content: 39.36
Gene sequence:
>282_bases TTGTTGATTTTGGTAACAAATTCGCAAGTTTTTTTGGGATCGACTTTAGCCATCGACTGGGAATGGTCTCCAGAGGTGTT GTTACCCCTGCGGTTGCCTGGGGTGATGGCATCAGTTTTTGCCCATCGCAGTTTGTCGATGCTTGATGCTTTGCGGGTGG AGATAGAATCAGAAAAAAAGTCGGCGATCGCGAAAACAGAAAAAAGATTAATTAAAGCAGGTGGAGTCAGAAAAAAGAAT TTAACAAAGGAAGAAGAAATAATTTTAAAATTATTTTATTGA
Upstream 100 bases:
>100_bases TTTGTGGGTTTTGCGACTTTTAGCAGTGATCGCAATTTGAGTCTGGTTTTAGACCGACGTACTAACAAACATCATTCCGA GTGGGTGTTGTTCTATATCT
Downstream 100 bases:
>100_bases CATCAAATACCAACTTTTCAAAGATTAAGAATTAACTTTGGTATAAGTGAATCAAGTGCTAATAATATTTTTCATTACTG GATAGATATTCTCAGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MLILVTNSQVFLGSTLAIDWEWSPEVLLPLRLPGVMASVFAHRSLSMLDALRVEIESEKKSAIAKTEKRLIKAGGVRKKN LTKEEEIILKLFY
Sequences:
>Translated_93_residues MLILVTNSQVFLGSTLAIDWEWSPEVLLPLRLPGVMASVFAHRSLSMLDALRVEIESEKKSAIAKTEKRLIKAGGVRKKN LTKEEEIILKLFY >Mature_93_residues MLILVTNSQVFLGSTLAIDWEWSPEVLLPLRLPGVMASVFAHRSLSMLDALRVEIESEKKSAIAKTEKRLIKAGGVRKKN LTKEEEIILKLFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10511; Mature: 10511
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILVTNSQVFLGSTLAIDWEWSPEVLLPLRLPGVMASVFAHRSLSMLDALRVEIESEKK CEEEEECCCEEECEEEEEEECCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHEECCCHH SAIAKTEKRLIKAGGVRKKNLTKEEEIILKLFY HHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECC >Mature Secondary Structure MLILVTNSQVFLGSTLAIDWEWSPEVLLPLRLPGVMASVFAHRSLSMLDALRVEIESEKK CEEEEECCCEEECEEEEEEECCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHEECCCHH SAIAKTEKRLIKAGGVRKKNLTKEEEIILKLFY HHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA