Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475578

Identifier: 113475578

GI number: 113475578

Start: 2959029

End: 2959595

Strand: Direct

Name: 113475578

Synonym: Tery_1911

Alternate gene names: NA

Gene position: 2959029-2959595 (Clockwise)

Preceding gene: 113475574

Following gene: 113475579

Centisome position: 38.18

GC content: 37.21

Gene sequence:

>567_bases
ATGTCAAATTCATTAGACTCCCCTTCTTCCTTACCACCTGCAGTCGAACAAGTAGCCAAAGCTCTGCGACTAGGTGGATG
GATTTGTTTTTGGGTACAACTTGTCCTCGGTATGGTTTCAGGTATAATTTTTATTTTTGCTGTAGGTTTACTAAGCCAGA
ATACTGGAGCTGGCACAGGAGGTGGACTATTTTTTGCAGTTTGTAGTCTTGTGGTACTAGGATTCAGTATTTTCTTGTCA
TTTCGGTATACCCGCTTAGCAAGGCAATTGCGATCACAAATATCTTCTTTAAGGCCAAGCAGGGCAGATACAACTCAAAA
AGTAAAAAGGACTTTAATTATTAACTTAGTTGGGATGAGTCTAGCTTTATTAGGAGGAGAAGCAATTGGAGGTATTTTAT
TAGGCAAATCCTTAGTGAGTAAGTCATTTGTATTTAACCCTACAGAACTAGAAAAATTTACACTAGATATTTTTATACTC
TTGGGTAATACTCACATAATTGTAGCTCATTTTATTGGGATTATAGTAGGGCTATTTTTGCTTGATAGGGTTTACAACAA
GCAGTGA

Upstream 100 bases:

>100_bases
TAAAAGGAGTCGACCCAGTGTCAATATCTCTGTGCAAAAATTTTAGCGAGAGAGTCGAGAAGCTCCACAATTAAAGTTTT
CACCGAAAAATTTGGTAAGT

Downstream 100 bases:

>100_bases
AGTTGACAATAGTTTTCTATTTTGGATATCCTCAAAACTATCTTGAAAGCCTACGATAATATGAATATTTTTTTTAGTGA
TTGATTGCCTCAGTAGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSNSLDSPSSLPPAVEQVAKALRLGGWICFWVQLVLGMVSGIIFIFAVGLLSQNTGAGTGGGLFFAVCSLVVLGFSIFLS
FRYTRLARQLRSQISSLRPSRADTTQKVKRTLIINLVGMSLALLGGEAIGGILLGKSLVSKSFVFNPTELEKFTLDIFIL
LGNTHIIVAHFIGIIVGLFLLDRVYNKQ

Sequences:

>Translated_188_residues
MSNSLDSPSSLPPAVEQVAKALRLGGWICFWVQLVLGMVSGIIFIFAVGLLSQNTGAGTGGGLFFAVCSLVVLGFSIFLS
FRYTRLARQLRSQISSLRPSRADTTQKVKRTLIINLVGMSLALLGGEAIGGILLGKSLVSKSFVFNPTELEKFTLDIFIL
LGNTHIIVAHFIGIIVGLFLLDRVYNKQ
>Mature_187_residues
SNSLDSPSSLPPAVEQVAKALRLGGWICFWVQLVLGMVSGIIFIFAVGLLSQNTGAGTGGGLFFAVCSLVVLGFSIFLSF
RYTRLARQLRSQISSLRPSRADTTQKVKRTLIINLVGMSLALLGGEAIGGILLGKSLVSKSFVFNPTELEKFTLDIFILL
GNTHIIVAHFIGIIVGLFLLDRVYNKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20303; Mature: 20172

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSLDSPSSLPPAVEQVAKALRLGGWICFWVQLVLGMVSGIIFIFAVGLLSQNTGAGTG
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGLFFAVCSLVVLGFSIFLSFRYTRLARQLRSQISSLRPSRADTTQKVKRTLIINLVGMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LALLGGEAIGGILLGKSLVSKSFVFNPTELEKFTLDIFILLGNTHIIVAHFIGIIVGLFL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHH
LDRVYNKQ
HHHHHCCC
>Mature Secondary Structure 
SNSLDSPSSLPPAVEQVAKALRLGGWICFWVQLVLGMVSGIIFIFAVGLLSQNTGAGTG
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGLFFAVCSLVVLGFSIFLSFRYTRLARQLRSQISSLRPSRADTTQKVKRTLIINLVGMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LALLGGEAIGGILLGKSLVSKSFVFNPTELEKFTLDIFILLGNTHIIVAHFIGIIVGLFL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHH
LDRVYNKQ
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA