| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475487
Identifier: 113475487
GI number: 113475487
Start: 2775364
End: 2775552
Strand: Direct
Name: 113475487
Synonym: Tery_1818
Alternate gene names: NA
Gene position: 2775364-2775552 (Clockwise)
Preceding gene: 113475486
Following gene: 113475488
Centisome position: 35.81
GC content: 26.46
Gene sequence:
>189_bases TTGGAAAGTTTTAGATGTTTGGGTATTGACCATTCTTCAGTAACAGTAATTAAAAATTCAGCTAACAGATATTTTTTGAA TTTTGTAGTAGAAATACAGTCAGAAACTTTATCTAAAAATGATAATTCAATTGGAATAAATTTAGGACTTAAAACTTTTG CAAGAGTAGGAAGTTTGATAAAAAGCTAG
Upstream 100 bases:
>100_bases AATCCAAAACTCACGCCCCAGGAAATCACCGGCTAACTTCTAGTTTAGTTTACTTACCAGAGTATTTAAGTATATCAAGA AAAACCATATTTAGCAAAGA
Downstream 100 bases:
>100_bases ACCTCTCAAGCACAAGAATAGGAATGTTTAAACTCTGGTGGCTAACAGCAATGGTCGTGGAAAATACAGTAATAAAAATA TTAATTGTTCCTTGGGCAAA
Product: IS605 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MESFRCLGIDHSSVTVIKNSANRYFLNFVVEIQSETLSKNDNSIGINLGLKTFARVGSLIKS
Sequences:
>Translated_62_residues MESFRCLGIDHSSVTVIKNSANRYFLNFVVEIQSETLSKNDNSIGINLGLKTFARVGSLIKS >Mature_62_residues MESFRCLGIDHSSVTVIKNSANRYFLNFVVEIQSETLSKNDNSIGINLGLKTFARVGSLIKS
Specific function: Unknown
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6864; Mature: 6864
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESFRCLGIDHSSVTVIKNSANRYFLNFVVEIQSETLSKNDNSIGINLGLKTFARVGSLI CCCCEEEECCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHH KS CC >Mature Secondary Structure MESFRCLGIDHSSVTVIKNSANRYFLNFVVEIQSETLSKNDNSIGINLGLKTFARVGSLI CCCCEEEECCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHH KS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA