| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is fabH
Identifier: 113475486
GI number: 113475486
Start: 2773777
End: 2774766
Strand: Direct
Name: fabH
Synonym: Tery_1817
Alternate gene names: 113475486
Gene position: 2773777-2774766 (Clockwise)
Preceding gene: 113475485
Following gene: 113475487
Centisome position: 35.79
GC content: 38.08
Gene sequence:
>990_bases ATGACAAATATAGGCGTTTCTATAATTGGAAGTGGTTCTGCAATACCAAAAACATCTCTAGATAATCAACAATTATCCCA AATAGTAGAGACTTCTGACGAATGGATCATTTCTCGCACTGGAATTAATAAGCGACAGCTAGTAGATACAACAGAATCAT TATGTAGCCTTGCTACTCAAGCATCTCTAGCAGCTCTTAACCAAGCAAATATTACTCCTAAAGATATTGACCTAATTATT CTGGCTACATCTACTCCTGATGACTTATTTGGTACTGCATGTAAAATTCAATGGGAGTTGGGCGCACAGAAAGCAGTTGC TTTTGACATAACTGTGGCTTGTTCTGGTTTTCTCTTTGCTCTGGTTACAGGAGCGCAATTTATTCGTAATGGAGTTTATC AAAATGTTTTGTTAATTGGGGCAGATATTCTCTCGCGTTGGGTAGACTGGGAAGACCGACGGACTTGTGTTTTATTTGGA GATGGGGCAGGGGCAGTACTTTTACAAGCTTCAGAAAGCGATCGCCTGCTGGGTTTTGAACTTGGTAGTGATGGTAGTCA AAATAGCTGTTTAAGTCTTTCTTACCAACCCCAAGAAAAGAGAATAATTGAGGGAGTAACTGTTAGTCAAGGTACTTATC AACCAATAGCTATGAATGGTAAAGAAGTCTATCGTTTTGTAGTACAAAAAGTACCGGAAGCTATAGAAAAAGCTTTATTA AAAGCTAATATTGATATTGATAAACTTGACTGGTTGCTATTACACCAAGCTAACCAAAGAATCCTTGATGCTGTTGCTAA TAGATTGAATATTCCACCAGAAAAAGTTATTAGTAATCTACGAAATTATGGCAATACTTCTGCTGCTTCTATACCGCTAG CTTTAGATGAAGTTGTTAGGGAAGGACTTGTTAAATCAGGAGACATTATTGCTGCTTCTGGCTTTGGGGCTGGATTAAGT TGGGGTGCAGTAATTTTTCAATGGAACTGA
Upstream 100 bases:
>100_bases ATCAAGAAAAGTTTAGGAATGTCGAAAGTTGTAGATTAAGTCTACATTGATATGAATAATAAACAATACTAGAAAATTAA TAATAATTAAAAACAGATAG
Downstream 100 bases:
>100_bases TAGGATTAATATCAAGATTTTCATCTTGCTTTTTACTTTATTCAAAATTTATACCAAAAAAATTTCTCTGAAATATCGTC CATAAGTGGGCGAATTTTTT
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTNIGVSIIGSGSAIPKTSLDNQQLSQIVETSDEWIISRTGINKRQLVDTTESLCSLATQASLAALNQANITPKDIDLII LATSTPDDLFGTACKIQWELGAQKAVAFDITVACSGFLFALVTGAQFIRNGVYQNVLLIGADILSRWVDWEDRRTCVLFG DGAGAVLLQASESDRLLGFELGSDGSQNSCLSLSYQPQEKRIIEGVTVSQGTYQPIAMNGKEVYRFVVQKVPEAIEKALL KANIDIDKLDWLLLHQANQRILDAVANRLNIPPEKVISNLRNYGNTSAASIPLALDEVVREGLVKSGDIIAASGFGAGLS WGAVIFQWN
Sequences:
>Translated_329_residues MTNIGVSIIGSGSAIPKTSLDNQQLSQIVETSDEWIISRTGINKRQLVDTTESLCSLATQASLAALNQANITPKDIDLII LATSTPDDLFGTACKIQWELGAQKAVAFDITVACSGFLFALVTGAQFIRNGVYQNVLLIGADILSRWVDWEDRRTCVLFG DGAGAVLLQASESDRLLGFELGSDGSQNSCLSLSYQPQEKRIIEGVTVSQGTYQPIAMNGKEVYRFVVQKVPEAIEKALL KANIDIDKLDWLLLHQANQRILDAVANRLNIPPEKVISNLRNYGNTSAASIPLALDEVVREGLVKSGDIIAASGFGAGLS WGAVIFQWN >Mature_328_residues TNIGVSIIGSGSAIPKTSLDNQQLSQIVETSDEWIISRTGINKRQLVDTTESLCSLATQASLAALNQANITPKDIDLIIL ATSTPDDLFGTACKIQWELGAQKAVAFDITVACSGFLFALVTGAQFIRNGVYQNVLLIGADILSRWVDWEDRRTCVLFGD GAGAVLLQASESDRLLGFELGSDGSQNSCLSLSYQPQEKRIIEGVTVSQGTYQPIAMNGKEVYRFVVQKVPEAIEKALLK ANIDIDKLDWLLLHQANQRILDAVANRLNIPPEKVISNLRNYGNTSAASIPLALDEVVREGLVKSGDIIAASGFGAGLSW GAVIFQWN
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family
Homologues:
Organism=Escherichia coli, GI1787333, Length=322, Percent_Identity=37.5776397515528, Blast_Score=242, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABH_TRIEI (Q114K0)
Other databases:
- EMBL: CP000393 - RefSeq: YP_721547.1 - ProteinModelPortal: Q114K0 - SMR: Q114K0 - STRING: Q114K0 - GeneID: 4244531 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_1817 - NMPDR: fig|203124.1.peg.396 - eggNOG: COG0332 - HOGENOM: HBG649927 - OMA: ERHVIAN - PhylomeDB: Q114K0 - ProtClustDB: PRK09352 - BioCyc: TERY203124:TERY_1817-MONOMER - GO: GO:0005737 - HAMAP: MF_01815 - InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 - Gene3D: G3DSA:3.40.47.10 - TIGRFAMs: TIGR00747
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C; SSF53901 Thiolase-like
EC number: =2.3.1.41
Molecular weight: Translated: 35526; Mature: 35395
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: ACT_SITE 114-114 ACT_SITE 255-255 ACT_SITE 285-285
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIGVSIIGSGSAIPKTSLDNQQLSQIVETSDEWIISRTGINKRQLVDTTESLCSLATQ CCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH ASLAALNQANITPKDIDLIILATSTPDDLFGTACKIQWELGAQKAVAFDITVACSGFLFA HHHHHHHCCCCCCCCEEEEEEEECCCHHHCCCEEEEEEECCCCEEEEEEEHHHHHHHHHH LVTGAQFIRNGVYQNVLLIGADILSRWVDWEDRRTCVLFGDGAGAVLLQASESDRLLGFE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEE LGSDGSQNSCLSLSYQPQEKRIIEGVTVSQGTYQPIAMNGKEVYRFVVQKVPEAIEKALL ECCCCCCCCEEEEEECCCHHHHHCCEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHH KANIDIDKLDWLLLHQANQRILDAVANRLNIPPEKVISNLRNYGNTSAASIPLALDEVVR HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH EGLVKSGDIIAASGFGAGLSWGAVIFQWN HCCCCCCCEEEECCCCCCCCCCEEEEEEC >Mature Secondary Structure TNIGVSIIGSGSAIPKTSLDNQQLSQIVETSDEWIISRTGINKRQLVDTTESLCSLATQ CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH ASLAALNQANITPKDIDLIILATSTPDDLFGTACKIQWELGAQKAVAFDITVACSGFLFA HHHHHHHCCCCCCCCEEEEEEEECCCHHHCCCEEEEEEECCCCEEEEEEEHHHHHHHHHH LVTGAQFIRNGVYQNVLLIGADILSRWVDWEDRRTCVLFGDGAGAVLLQASESDRLLGFE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEE LGSDGSQNSCLSLSYQPQEKRIIEGVTVSQGTYQPIAMNGKEVYRFVVQKVPEAIEKALL ECCCCCCCCEEEEEECCCHHHHHCCEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHH KANIDIDKLDWLLLHQANQRILDAVANRLNIPPEKVISNLRNYGNTSAASIPLALDEVVR HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH EGLVKSGDIIAASGFGAGLSWGAVIFQWN HCCCCCCCEEEECCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA