| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475458
Identifier: 113475458
GI number: 113475458
Start: 2728673
End: 2730601
Strand: Direct
Name: 113475458
Synonym: Tery_1787
Alternate gene names: NA
Gene position: 2728673-2730601 (Clockwise)
Preceding gene: 113475457
Following gene: 113475463
Centisome position: 35.21
GC content: 33.23
Gene sequence:
>1929_bases ATGCAAACTAACAATCATTTATCCATAAATCCTTATGTTTTTGGCAAACCAATTTATGAATACAACAACTTATTTGGTAG AAAAAATGATGTTGATAAAATTAAAGATCACATCATTAACAAAGATATAAAAATAACTTTATTGCATGTCCAAAGACGTA TTGGTAAAACTTCATTGATAACTTGTTTGCCTCAGTCTTTCACTGAGGAGCAGAATGGTGTTAAGTTTGTTACTTTTTCA TTTCAAGGTTATAAAGATAAGCCAATCCCTGAAATACTAAATTATCTTGCTGATGAGATCGCTGGTACTATTCAACTTCC TCAAAAAGTAAGAGATCAGGCTGATACTACGCACAACTTTTTTGAACTTTTTTTGCCGAAAGTTATCGATCAATATTTGT CAGGTCAAAAGTTGGTTCTTCTCCTTGATGAATTTGATGTTTTAGAAGAAAAAGATAAGAAAGGAAAAGTATTATTTGAT TACTTAAAAAAAGCTGTTAAGGAACAAAAAAAACTATTTGCTATTCTGGTTTTTGGTAGACCCTTAAAGGATATGAAGTA TCTAGAAACATTTTTACAAGAAGAAGGTCAAGAGACTATAGAAGTTGGTTTACTGGATTATGAAGGTACACAAGATTTGA TTGTTGAGCCACTTAAGAGAATACAGAGCGTATTTAGATATGAAAAAAGTGCAATAGATAGAATTTGGGAACTATCTGCT GGCCATCCTTCTTTGACACAACTGCTGTGCTCAAATGTTTTTGTTCATTGTAGGAATAAGCAACAGAGTGTAGTTCGGAA AGACGATGTAGACTCAATTTTAAGTCAAGCAATGGAAGAAGGCCAGGCAATATTACAAGGCTTTCTAGAGCCTTTAAGCG ATATTGAAAAGTTATTTTTTTTTGCAGTAGCAGAAGCTCAAGAACAAGGCACAGACCCATTAAAGATTCTGAAAATAATA CAAAAAACTACAATAACACCGGCAGATTTTAGAAGAGCACGAGAGCGTTTAATAGAGTTAGGCTTTGTAGAAAAAAATGG CAAAGGTCTTAAAATAAAAGTTGAATTAGTCCGGCTCTGGCTAATAGAAAAAAACCCCTTACCCAACAATAAACAGAGGA AACCGAAGGAAGGAAGAAAAAAGATCAAACGTCATATAACCTCAAGTCAACCCAACAGACCTAACCCAGTTGCACAATTC ATTGCTTTTATTGCGTTGATAAGCGTTATAGTTTTTATTGGACAGAAGTTACTCTCTAGGATTGATAGCTCCAAAAACTA TGAACGCTTTCAGTCTGACTGTTACAGACTATCAGAGGAAATAAGCAACGCTTTAGAAGAGAAAAAAGATACAACGCAGT TGCAAGTCATCAAAAAAGTTAGAACTGAATGGTCGAGAGAAAAAAAAGGCTTATTAGACAAACAATGCCCATATTCTTAT GAACTAGATGCAAAATATAATGCATTACTACAGTACTATGGACAAAGTAAAGTAGATACTGGAAACTTTGATGAAGGTAT AGAAGCATTTTGTGAGATTACCAGTGAATACAAGAATTTTTCTGACATTAAAAAAATCTTTGAAAGATGGGTACTAATAG ACAAAAGATTATCTAATGAAAGTACAAAAAGGGTGCTGAAGCAAATAATTAAGCAAAATCAATCAGGAAATGATTGCCTT GTTTATTCATTTAAAGACGATAGAAATAAAAATGATCTGTATGACCTGAAAGCTCAAGTTCATGCTGATGATTATGAGTA TGGCGAAGCGGTCGAGTCATATTGCAAAATTACAGAAAACTATTATAAGTTTGAGACTGTTGTTAAACAGCTAAAAAAAT TGAAACGAGAAAATGTAGAGAAAGTAGAGGAAAAACTCAAAGAATTAAACGATCCGTGTCCAGCATTTCCTCCCTCACCA GACAATTAA
Upstream 100 bases:
>100_bases TAATTAATGATTTATTTCCTAAGAAGCCCTGGATCCAGAGGCTTTGGTATATGGCCTTTTTAAATGAATAATATTCAGAT AATAACTAAACAATCTAATA
Downstream 100 bases:
>100_bases TTAATATTGCTCCCTTGGATTTTCCCAAGAATTATCGCTACCTTGGAACTCTTCTTGAGGTACTACTTTAATTCCTTGCC TAAATACTCTAGCTATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MQTNNHLSINPYVFGKPIYEYNNLFGRKNDVDKIKDHIINKDIKITLLHVQRRIGKTSLITCLPQSFTEEQNGVKFVTFS FQGYKDKPIPEILNYLADEIAGTIQLPQKVRDQADTTHNFFELFLPKVIDQYLSGQKLVLLLDEFDVLEEKDKKGKVLFD YLKKAVKEQKKLFAILVFGRPLKDMKYLETFLQEEGQETIEVGLLDYEGTQDLIVEPLKRIQSVFRYEKSAIDRIWELSA GHPSLTQLLCSNVFVHCRNKQQSVVRKDDVDSILSQAMEEGQAILQGFLEPLSDIEKLFFFAVAEAQEQGTDPLKILKII QKTTITPADFRRARERLIELGFVEKNGKGLKIKVELVRLWLIEKNPLPNNKQRKPKEGRKKIKRHITSSQPNRPNPVAQF IAFIALISVIVFIGQKLLSRIDSSKNYERFQSDCYRLSEEISNALEEKKDTTQLQVIKKVRTEWSREKKGLLDKQCPYSY ELDAKYNALLQYYGQSKVDTGNFDEGIEAFCEITSEYKNFSDIKKIFERWVLIDKRLSNESTKRVLKQIIKQNQSGNDCL VYSFKDDRNKNDLYDLKAQVHADDYEYGEAVESYCKITENYYKFETVVKQLKKLKRENVEKVEEKLKELNDPCPAFPPSP DN
Sequences:
>Translated_642_residues MQTNNHLSINPYVFGKPIYEYNNLFGRKNDVDKIKDHIINKDIKITLLHVQRRIGKTSLITCLPQSFTEEQNGVKFVTFS FQGYKDKPIPEILNYLADEIAGTIQLPQKVRDQADTTHNFFELFLPKVIDQYLSGQKLVLLLDEFDVLEEKDKKGKVLFD YLKKAVKEQKKLFAILVFGRPLKDMKYLETFLQEEGQETIEVGLLDYEGTQDLIVEPLKRIQSVFRYEKSAIDRIWELSA GHPSLTQLLCSNVFVHCRNKQQSVVRKDDVDSILSQAMEEGQAILQGFLEPLSDIEKLFFFAVAEAQEQGTDPLKILKII QKTTITPADFRRARERLIELGFVEKNGKGLKIKVELVRLWLIEKNPLPNNKQRKPKEGRKKIKRHITSSQPNRPNPVAQF IAFIALISVIVFIGQKLLSRIDSSKNYERFQSDCYRLSEEISNALEEKKDTTQLQVIKKVRTEWSREKKGLLDKQCPYSY ELDAKYNALLQYYGQSKVDTGNFDEGIEAFCEITSEYKNFSDIKKIFERWVLIDKRLSNESTKRVLKQIIKQNQSGNDCL VYSFKDDRNKNDLYDLKAQVHADDYEYGEAVESYCKITENYYKFETVVKQLKKLKRENVEKVEEKLKELNDPCPAFPPSP DN >Mature_642_residues MQTNNHLSINPYVFGKPIYEYNNLFGRKNDVDKIKDHIINKDIKITLLHVQRRIGKTSLITCLPQSFTEEQNGVKFVTFS FQGYKDKPIPEILNYLADEIAGTIQLPQKVRDQADTTHNFFELFLPKVIDQYLSGQKLVLLLDEFDVLEEKDKKGKVLFD YLKKAVKEQKKLFAILVFGRPLKDMKYLETFLQEEGQETIEVGLLDYEGTQDLIVEPLKRIQSVFRYEKSAIDRIWELSA GHPSLTQLLCSNVFVHCRNKQQSVVRKDDVDSILSQAMEEGQAILQGFLEPLSDIEKLFFFAVAEAQEQGTDPLKILKII QKTTITPADFRRARERLIELGFVEKNGKGLKIKVELVRLWLIEKNPLPNNKQRKPKEGRKKIKRHITSSQPNRPNPVAQF IAFIALISVIVFIGQKLLSRIDSSKNYERFQSDCYRLSEEISNALEEKKDTTQLQVIKKVRTEWSREKKGLLDKQCPYSY ELDAKYNALLQYYGQSKVDTGNFDEGIEAFCEITSEYKNFSDIKKIFERWVLIDKRLSNESTKRVLKQIIKQNQSGNDCL VYSFKDDRNKNDLYDLKAQVHADDYEYGEAVESYCKITENYYKFETVVKQLKKLKRENVEKVEEKLKELNDPCPAFPPSP DN
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74688; Mature: 74688
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTNNHLSINPYVFGKPIYEYNNLFGRKNDVDKIKDHIINKDIKITLLHVQRRIGKTSLI CCCCCCEEECCEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHCCHHHH TCLPQSFTEEQNGVKFVTFSFQGYKDKPIPEILNYLADEIAGTIQLPQKVRDQADTTHNF HHCCHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHH FELFLPKVIDQYLSGQKLVLLLDEFDVLEEKDKKGKVLFDYLKKAVKEQKKLFAILVFGR HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEHHEECC PLKDMKYLETFLQEEGQETIEVGLLDYEGTQDLIVEPLKRIQSVFRYEKSAIDRIWELSA CHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GHPSLTQLLCSNVFVHCRNKQQSVVRKDDVDSILSQAMEEGQAILQGFLEPLSDIEKLFF CCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVAEAQEQGTDPLKILKIIQKTTITPADFRRARERLIELGFVEKNGKGLKIKVELVRLW HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCEEEEEEHHHHH LIEKNPLPNNKQRKPKEGRKKIKRHITSSQPNRPNPVAQFIAFIALISVIVFIGQKLLSR HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IDSSKNYERFQSDCYRLSEEISNALEEKKDTTQLQVIKKVRTEWSREKKGLLDKQCPYSY HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE ELDAKYNALLQYYGQSKVDTGNFDEGIEAFCEITSEYKNFSDIKKIFERWVLIDKRLSNE ECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH STKRVLKQIIKQNQSGNDCLVYSFKDDRNKNDLYDLKAQVHADDYEYGEAVESYCKITEN HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH YYKFETVVKQLKKLKRENVEKVEEKLKELNDPCPAFPPSPDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQTNNHLSINPYVFGKPIYEYNNLFGRKNDVDKIKDHIINKDIKITLLHVQRRIGKTSLI CCCCCCEEECCEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHCCHHHH TCLPQSFTEEQNGVKFVTFSFQGYKDKPIPEILNYLADEIAGTIQLPQKVRDQADTTHNF HHCCHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHH FELFLPKVIDQYLSGQKLVLLLDEFDVLEEKDKKGKVLFDYLKKAVKEQKKLFAILVFGR HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEHHEECC PLKDMKYLETFLQEEGQETIEVGLLDYEGTQDLIVEPLKRIQSVFRYEKSAIDRIWELSA CHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GHPSLTQLLCSNVFVHCRNKQQSVVRKDDVDSILSQAMEEGQAILQGFLEPLSDIEKLFF CCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVAEAQEQGTDPLKILKIIQKTTITPADFRRARERLIELGFVEKNGKGLKIKVELVRLW HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCEEEEEEHHHHH LIEKNPLPNNKQRKPKEGRKKIKRHITSSQPNRPNPVAQFIAFIALISVIVFIGQKLLSR HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IDSSKNYERFQSDCYRLSEEISNALEEKKDTTQLQVIKKVRTEWSREKKGLLDKQCPYSY HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE ELDAKYNALLQYYGQSKVDTGNFDEGIEAFCEITSEYKNFSDIKKIFERWVLIDKRLSNE ECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH STKRVLKQIIKQNQSGNDCLVYSFKDDRNKNDLYDLKAQVHADDYEYGEAVESYCKITEN HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH YYKFETVVKQLKKLKRENVEKVEEKLKELNDPCPAFPPSPDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA