Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475453

Identifier: 113475453

GI number: 113475453

Start: 2720539

End: 2721768

Strand: Direct

Name: 113475453

Synonym: Tery_1782

Alternate gene names: NA

Gene position: 2720539-2721768 (Clockwise)

Preceding gene: 113475452

Following gene: 113475454

Centisome position: 35.1

GC content: 31.63

Gene sequence:

>1230_bases
ATGTCATCCAATAAATTCTTTCCCAATAAACCTGTTCCTCCAGAGAAGTTTGTCGGTAGAAAATCTGAACTATACACAAT
TTTTGACCAAGTTAATAATCGTGGTCATGTGGCTATTCATGGTGCTTCTGGTATGGGTAAATCATCTTTACTCGACTATA
TAAAATATCCTCATTTTTGGGATGATAAAGGATTAAATTTTTCAGAGGCTTTGATTGTTTATCACAACTGTGAGGGTTCA
TTTACGCCAAATAGTTTTTGGCAAGAAATTTTACAAGAGTTAAGAAATGAAGCTGAAGGTGATACAGATTTACAGAGTAA
GATTGATGATGTCTTAAAATTAGAAACAATAGAAATAAGAGATATACGTCGAATACTTAAACAAATTGGGAAAAGAAATA
AATTTTTATTATTATTATTAGATGACTATAATGGAATACTTCGTACACCAGAATATTATAGCAAAGACTATCAAAAGTCT
AGAGAAGTACAGACGTTTTTAAGTGGGTTGCGTAATCTGGCAGTTCATAGTACAGAAAGTCAATATTTCTCAACAGTTGT
TGCTGCATTCCAAAAAGTGGATGAGTTAGGTCCAGAGATTCCTCGTGGTGGTTCTCCTTGGTATAATCATTATCTATATG
TAGATTTAAAACCTTTTAGTCGGGAGGATATTAATAATTATTTTTTTAATTCCGATAGTCATTTCTTTATTTCAATTCCT
GAAAATATTCAGAAAGAAAAAGTGTTAGAAATTACTAGTGGATATCCAATCTTACTTCAACAGGCAGGTTATATATTTTC
TAAACTGGATCGAGTTATTGATATTAATACTTTTAAGGCAGAACTTAAAAATCAAACTGAACAGATATTTAAGGATATAT
GGAGAGAATTGACTACAGACGAACAAAAGCTTTTACAGCTCATTGTCATTGATAACTTCAAAGGAGAAGTTAATGGAAAG
CGTTATTCTCATGATGGTATAGATCAAGTATTTGAGGAAAATAAGTATAAACTGACAACCTTGGAGCAAAAAGGTGTTAT
CTCTCAGAGCCCAGACCAGGATAAATATAATTTTTCTTCTTCTTTAATGCAAGATTTAGTTCTTCAAAAATTGGCTGAAA
GTATTTGGGACCCTAAAAAGGGTAAAATCTTGTTTGACAGCTTTGGAACCAAGATTAACTATGAGCAGTCCATGATTGAA
GAATTATTAGGAATAATCCCTTTTAATTAA

Upstream 100 bases:

>100_bases
TATAGCGCGTATTAGGTTTGACTAGAAATTTAACAACCCTGAATACTCTGATATAATTGAGTGTTATAGTCAAACTAAAG
TTCAAATAATTTATCTAATT

Downstream 100 bases:

>100_bases
TCAAAAAATCAAGAATAGTCAACTCAATTTTGGCAATTTTCTTTATACTTAAATAAAAAATTAAACCCTAATATGAGGTA
GTACTTCAGATGAGTAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSSNKFFPNKPVPPEKFVGRKSELYTIFDQVNNRGHVAIHGASGMGKSSLLDYIKYPHFWDDKGLNFSEALIVYHNCEGS
FTPNSFWQEILQELRNEAEGDTDLQSKIDDVLKLETIEIRDIRRILKQIGKRNKFLLLLLDDYNGILRTPEYYSKDYQKS
REVQTFLSGLRNLAVHSTESQYFSTVVAAFQKVDELGPEIPRGGSPWYNHYLYVDLKPFSREDINNYFFNSDSHFFISIP
ENIQKEKVLEITSGYPILLQQAGYIFSKLDRVIDINTFKAELKNQTEQIFKDIWRELTTDEQKLLQLIVIDNFKGEVNGK
RYSHDGIDQVFEENKYKLTTLEQKGVISQSPDQDKYNFSSSLMQDLVLQKLAESIWDPKKGKILFDSFGTKINYEQSMIE
ELLGIIPFN

Sequences:

>Translated_409_residues
MSSNKFFPNKPVPPEKFVGRKSELYTIFDQVNNRGHVAIHGASGMGKSSLLDYIKYPHFWDDKGLNFSEALIVYHNCEGS
FTPNSFWQEILQELRNEAEGDTDLQSKIDDVLKLETIEIRDIRRILKQIGKRNKFLLLLLDDYNGILRTPEYYSKDYQKS
REVQTFLSGLRNLAVHSTESQYFSTVVAAFQKVDELGPEIPRGGSPWYNHYLYVDLKPFSREDINNYFFNSDSHFFISIP
ENIQKEKVLEITSGYPILLQQAGYIFSKLDRVIDINTFKAELKNQTEQIFKDIWRELTTDEQKLLQLIVIDNFKGEVNGK
RYSHDGIDQVFEENKYKLTTLEQKGVISQSPDQDKYNFSSSLMQDLVLQKLAESIWDPKKGKILFDSFGTKINYEQSMIE
ELLGIIPFN
>Mature_408_residues
SSNKFFPNKPVPPEKFVGRKSELYTIFDQVNNRGHVAIHGASGMGKSSLLDYIKYPHFWDDKGLNFSEALIVYHNCEGSF
TPNSFWQEILQELRNEAEGDTDLQSKIDDVLKLETIEIRDIRRILKQIGKRNKFLLLLLDDYNGILRTPEYYSKDYQKSR
EVQTFLSGLRNLAVHSTESQYFSTVVAAFQKVDELGPEIPRGGSPWYNHYLYVDLKPFSREDINNYFFNSDSHFFISIPE
NIQKEKVLEITSGYPILLQQAGYIFSKLDRVIDINTFKAELKNQTEQIFKDIWRELTTDEQKLLQLIVIDNFKGEVNGKR
YSHDGIDQVFEENKYKLTTLEQKGVISQSPDQDKYNFSSSLMQDLVLQKLAESIWDPKKGKILFDSFGTKINYEQSMIEE
LLGIIPFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47564; Mature: 47433

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNKFFPNKPVPPEKFVGRKSELYTIFDQVNNRGHVAIHGASGMGKSSLLDYIKYPHFW
CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCC
DDKGLNFSEALIVYHNCEGSFTPNSFWQEILQELRNEAEGDTDLQSKIDDVLKLETIEIR
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHH
DIRRILKQIGKRNKFLLLLLDDYNGILRTPEYYSKDYQKSREVQTFLSGLRNLAVHSTES
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QYFSTVVAAFQKVDELGPEIPRGGSPWYNHYLYVDLKPFSREDINNYFFNSDSHFFISIP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEEEECCCCHHHHHHHEECCCCEEEEECC
ENIQKEKVLEITSGYPILLQQAGYIFSKLDRVIDINTFKAELKNQTEQIFKDIWRELTTD
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
EQKLLQLIVIDNFKGEVNGKRYSHDGIDQVFEENKYKLTTLEQKGVISQSPDQDKYNFSS
HHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHCCCEEEEEEHHCCCCCCCCCCCCCCHHH
SLMQDLVLQKLAESIWDPKKGKILFDSFGTKINYEQSMIEELLGIIPFN
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSNKFFPNKPVPPEKFVGRKSELYTIFDQVNNRGHVAIHGASGMGKSSLLDYIKYPHFW
CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCC
DDKGLNFSEALIVYHNCEGSFTPNSFWQEILQELRNEAEGDTDLQSKIDDVLKLETIEIR
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHH
DIRRILKQIGKRNKFLLLLLDDYNGILRTPEYYSKDYQKSREVQTFLSGLRNLAVHSTES
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QYFSTVVAAFQKVDELGPEIPRGGSPWYNHYLYVDLKPFSREDINNYFFNSDSHFFISIP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEEEECCCCHHHHHHHEECCCCEEEEECC
ENIQKEKVLEITSGYPILLQQAGYIFSKLDRVIDINTFKAELKNQTEQIFKDIWRELTTD
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
EQKLLQLIVIDNFKGEVNGKRYSHDGIDQVFEENKYKLTTLEQKGVISQSPDQDKYNFSS
HHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHCCCEEEEEEHHCCCCCCCCCCCCCCHHH
SLMQDLVLQKLAESIWDPKKGKILFDSFGTKINYEQSMIEELLGIIPFN
HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA