| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475439
Identifier: 113475439
GI number: 113475439
Start: 2689465
End: 2689677
Strand: Direct
Name: 113475439
Synonym: Tery_1767
Alternate gene names: NA
Gene position: 2689465-2689677 (Clockwise)
Preceding gene: 113475438
Following gene: 113475440
Centisome position: 34.7
GC content: 34.74
Gene sequence:
>213_bases ATGCTGGTCACAATTCTTATACTTGATGTTGCTTTAGTTGCTTGGTCTCTGCATTTAATGCAAGAGTCATTCTATCATAA AGAGTGTTCTCTAATGCTTGCAAGTATCTTAGTCGCTATATCTGCTGTAGCAATGATGGTGGTTTATTTTCTTATGGGTA CTTGTATAACTCACCTAACTCAAATGTCTCAACATTCCTACACATATTTTTAA
Upstream 100 bases:
>100_bases GACTTGTAACTGTATATTCAAGATCTTAATATTTCTTGATATTTAGAAGCATTTTTAATAAATATTGTTAGAATAAGAGA ATTGTTACAAACTGTAACTT
Downstream 100 bases:
>100_bases TCGTACGATAGTGCCAAAATATTTATAAAAATGTTTCATTAGACTCTATTAAACTTTGATTAAGTGATTGTTGAGATTTA ATTAACTCTATCTATCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MLVTILILDVALVAWSLHLMQESFYHKECSLMLASILVAISAVAMMVVYFLMGTCITHLTQMSQHSYTYF
Sequences:
>Translated_70_residues MLVTILILDVALVAWSLHLMQESFYHKECSLMLASILVAISAVAMMVVYFLMGTCITHLTQMSQHSYTYF >Mature_70_residues MLVTILILDVALVAWSLHLMQESFYHKECSLMLASILVAISAVAMMVVYFLMGTCITHLTQMSQHSYTYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7961; Mature: 7961
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 12.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 10.0 %Met (Mature Protein) 12.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTILILDVALVAWSLHLMQESFYHKECSLMLASILVAISAVAMMVVYFLMGTCITHLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMSQHSYTYF HHHHCCCCCC >Mature Secondary Structure MLVTILILDVALVAWSLHLMQESFYHKECSLMLASILVAISAVAMMVVYFLMGTCITHLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMSQHSYTYF HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA