Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475426

Identifier: 113475426

GI number: 113475426

Start: 2672948

End: 2674414

Strand: Direct

Name: 113475426

Synonym: Tery_1754

Alternate gene names: NA

Gene position: 2672948-2674414 (Clockwise)

Preceding gene: 113475425

Following gene: 113475428

Centisome position: 34.49

GC content: 31.15

Gene sequence:

>1467_bases
ATGAAACTTGATAAATTACAAATTCAAAAACTGGAACAGTTTCTCGAAAAAATCAAAAATGACACCTATCCCGAACCTTC
AACCCTACTTCATAGCCAAATAACTCAACAAATGTTTGATGTATGTTTGAAACAAATATCTTTACCTCCTGCGGCAAAAA
TCTTAGATATTGGTTGCGGTCAAGGTGTGGCTTTGGAGATATTTAAAAAACATGGCTTTGCACCAATTGGAATTACTTTA
AATAACGAAGATGTAGCTATTTGCCAACAAAAAGGTTATGAAGTTTATCAAATGGATCAATCATTTCTAGATTTTGCAGA
TGACTATTTTGATTTTGTTTGGTGCCGACATTGTTTAGAACATAGCATTTTCCCATATTTTACTTTACAGGAAATTTATA
GAGTTATTAAAAATGAAGGTTATTTATATATAGAAGTACCTGCTCCCGATACCAGTTGCCGACATCAAACGAATAAAAAT
TACTATAGTGTATTGGGTAAAAGTATGTGGCTAGATTTAATTAAAAGAAGTGGATTTGAGATTTTACAAGTATTAGATAT
TCAATTTAATGTGCCTGCTGGTCCTGATATTTATTGGGGAATGATTCAGAAGAAAATTCGTTCTACTATAACTTCAAAAA
ATTCTGTCAAAATTATCAATTTTAAATGGGTATCTAACTCTGATAATCAAGAAATTAACCTTTCTCTAGACTCTAATGAA
TTTACTCAAAAAATGATGCTTAACTATTTTGAAAAGGGGCAAGTTTATGAGTCGGAAATTTTTCAATTAATTTCCAGATT
TCTCGAAGTCAATGATTGTTTTATTGATATTGGTGCTCATATTGGGTATTATTCGGTTTTGGCTGCCAAAATAGTGGGAA
GTAAAGGGAAAGTATTTGCTTTTGAGCCAGAATTATCAAATCATCAAAAAACTTTAGAAAATATCACTCTTAATCATCTG
AATAATATCAAACTATTTAATCTGGCTGTGGGTTCGGAAACTAAGCAAACACAAATATTTGTTAATCAAGATAATGATGG
GGGTCATGCTTTGTGGGATGTAGGTAAACATCCATTCAATAAAAAAAGTTTGAATAATCAAACAATGCAAAATACTCAAC
TATCTACACTAGATAATATTCTCAGCCAAGCTGGAAATATTACTAATTTAAAAATCATAAAAATTGATACTGAAGGAGGA
GAACTTGATGTGGTTAAAGGAGCTGTAAATACAATTCGCAAATATGATGTTCCATACATTATTTGTGAGATTAATAGATT
TGGTTTACAGCAAATGGGAACTAATGAAACTGAACTCCGGGAATTTATGAATTCTTTGGGCTATGAAACTTATTTGCTCA
CCTCAAACAGCAGTAACCAGTTAGTTAGGTTACCTATGGGCAAGTATTATGAAACATCCTATGTTTTTAATGTTCTATTT
ACAAGACAAAGTTTTATACCCCAATAG

Upstream 100 bases:

>100_bases
AAAGATAATTATTCAGTAAAAAAAAAATTATTTAATGATAAAATATTTACAAGTTAAAAATTTACTATTAACATAATTTA
ACTGCTTAAAAATATAAACT

Downstream 100 bases:

>100_bases
TTTTCAATAATAGGTAAATTAAGCAGTGACATAAAATTAATTAAATCTATCAAGGTTTGGGGAAAAAATAAACTTCAGTA
TTTCAACCCTAATACTGAGC

Product: FkbM family methyltransferase

Products: NA

Alternate protein names: FkbM Family Methyltransferase; Methyltransferase; Methyltransferase FkbM; Methyltransferase Type; SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Lipopolysaccharide Biosynthesis Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCGQGVALEIFKKHGFAPIGITL
NNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLEHSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKN
YYSVLGKSMWLDLIKRSGFEILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE
FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFAFEPELSNHQKTLENITLNHL
NNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFNKKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGG
ELDVVKGAVNTIRKYDVPYIICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF
TRQSFIPQ

Sequences:

>Translated_488_residues
MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCGQGVALEIFKKHGFAPIGITL
NNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLEHSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKN
YYSVLGKSMWLDLIKRSGFEILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE
FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFAFEPELSNHQKTLENITLNHL
NNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFNKKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGG
ELDVVKGAVNTIRKYDVPYIICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF
TRQSFIPQ
>Mature_488_residues
MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCGQGVALEIFKKHGFAPIGITL
NNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLEHSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKN
YYSVLGKSMWLDLIKRSGFEILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE
FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFAFEPELSNHQKTLENITLNHL
NNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFNKKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGG
ELDVVKGAVNTIRKYDVPYIICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF
TRQSFIPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56085; Mature: 56085

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCG
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCC
QGVALEIFKKHGFAPIGITLNNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLE
CCHHHHHHHHCCCEEEEEEECCCCEEEHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
HSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKNYYSVLGKSMWLDLIKRSGFE
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
ILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEECCHH
FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHCCCCCEEE
FEPELSNHQKTLENITLNHLNNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFN
ECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCC
KKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGGELDVVKGAVNTIRKYDVPYI
CCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHCCCCEE
ICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF
EEECCHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHH
TRQSFIPQ
HHHHCCCC
>Mature Secondary Structure
MKLDKLQIQKLEQFLEKIKNDTYPEPSTLLHSQITQQMFDVCLKQISLPPAAKILDIGCG
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCC
QGVALEIFKKHGFAPIGITLNNEDVAICQQKGYEVYQMDQSFLDFADDYFDFVWCRHCLE
CCHHHHHHHHCCCEEEEEEECCCCEEEHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
HSIFPYFTLQEIYRVIKNEGYLYIEVPAPDTSCRHQTNKNYYSVLGKSMWLDLIKRSGFE
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH
ILQVLDIQFNVPAGPDIYWGMIQKKIRSTITSKNSVKIINFKWVSNSDNQEINLSLDSNE
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEECCHH
FTQKMMLNYFEKGQVYESEIFQLISRFLEVNDCFIDIGAHIGYYSVLAAKIVGSKGKVFA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHCCCCCEEE
FEPELSNHQKTLENITLNHLNNIKLFNLAVGSETKQTQIFVNQDNDGGHALWDVGKHPFN
ECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCC
KKSLNNQTMQNTQLSTLDNILSQAGNITNLKIIKIDTEGGELDVVKGAVNTIRKYDVPYI
CCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHCCCCEE
ICEINRFGLQQMGTNETELREFMNSLGYETYLLTSNSSNQLVRLPMGKYYETSYVFNVLF
EEECCHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHH
TRQSFIPQ
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA