| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475424
Identifier: 113475424
GI number: 113475424
Start: 2670584
End: 2670853
Strand: Direct
Name: 113475424
Synonym: Tery_1752
Alternate gene names: NA
Gene position: 2670584-2670853 (Clockwise)
Preceding gene: 113475423
Following gene: 113475425
Centisome position: 34.46
GC content: 39.63
Gene sequence:
>270_bases ATGGATTCTCAAGCCCAAATCCAAGATGGACAAAAGTCAGATGCTCAAATAGATCTGCGAGGTACTCCATGTCCAATTAA TTTTGTGAGGACAAAACTGTATCTGGAAAAGATGATGCCTGGAGAAATTTTAGAGGTGTGGTTAGACTCAGGGGAGCCAA TAGAGCAAGTACCTGATAGTTTGATTGTGGAAGGTTATAAAATAGAAGAAATAAAAGAAAAGTGTGAATATTTTGTCCTC AAGGTGCGTCGCCCAGAAATGGTTGCATGA
Upstream 100 bases:
>100_bases ACCTTTGACAACTTGAATTTTAGCTGTACATACCCAAACGACAATAATCAACTTGATATGAGACTTTGTCTCAGTTTTAT AGAGCAGAAAATATTTAACT
Downstream 100 bases:
>100_bases ATTGGAATTCAGAAATAGGTGATGTATTTGAGAAGAACTGGTTAGGGACAGTAGTAGCAGTTCAGGCAAATTTTTACCAA GTTAAGATTGAGAGAAGTTA
Product: SirA-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MDSQAQIQDGQKSDAQIDLRGTPCPINFVRTKLYLEKMMPGEILEVWLDSGEPIEQVPDSLIVEGYKIEEIKEKCEYFVL KVRRPEMVA
Sequences:
>Translated_89_residues MDSQAQIQDGQKSDAQIDLRGTPCPINFVRTKLYLEKMMPGEILEVWLDSGEPIEQVPDSLIVEGYKIEEIKEKCEYFVL KVRRPEMVA >Mature_89_residues MDSQAQIQDGQKSDAQIDLRGTPCPINFVRTKLYLEKMMPGEILEVWLDSGEPIEQVPDSLIVEGYKIEEIKEKCEYFVL KVRRPEMVA
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10258; Mature: 10258
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQAQIQDGQKSDAQIDLRGTPCPINFVRTKLYLEKMMPGEILEVWLDSGEPIEQVPDS CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCHH LIVEGYKIEEIKEKCEYFVLKVRRPEMVA HHHCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDSQAQIQDGQKSDAQIDLRGTPCPINFVRTKLYLEKMMPGEILEVWLDSGEPIEQVPDS CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHCCHH LIVEGYKIEEIKEKCEYFVLKVRRPEMVA HHHCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA