| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475396
Identifier: 113475396
GI number: 113475396
Start: 2614511
End: 2614873
Strand: Reverse
Name: 113475396
Synonym: Tery_1720
Alternate gene names: NA
Gene position: 2614873-2614511 (Counterclockwise)
Preceding gene: 113475397
Following gene: 113475395
Centisome position: 33.74
GC content: 38.02
Gene sequence:
>363_bases ATGACAAAACATAATCAAATTGGCTTATTTAGGATTTTTGATTGTCAAAATTCTGATTCTATTGGTGATATTGTTTTTGT TCATGGTTTGGCGGGACATCCTTGGGCTACATGGCATCCTCAAGGTAAAACAGAAGGTTCTGATTTTTGGCCTTTTTGGC TGGGGGAGATTTTACGGGGAAAGGAAATAGATGTTAATGTCTGGAGCTTTGGATATGAAGCTCCTGGTTTGAAGTATTCT GGTCAGGGAATTTCACGTTTTGACCAGGCTAGTTATTTGCTAGAGTCTATTGAGGTTGATCATATTGGAGCTTCCCCTTT TATTTTTGTGACTCATAGTTTGGGTGGTTTGATTGTTAAATAG
Upstream 100 bases:
>100_bases ATTTGTTCAATTTTTCGGGCAAAGTGCAAACTTTCACCCCGCTAGCGGGCATAGTCAAGTATTTCGAGTGTACAATAGAG TTATACGAAACTCAGATAAG
Downstream 100 bases:
>100_bases GTAATTCGTACTGCTCAAAATTTTCCTCAGTATCAAGGTATTCTTCGACATATTAAGGGAATTGTCTTTTTATCTACTCC ACACAGGGGAATTCATTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTKHNQIGLFRIFDCQNSDSIGDIVFVHGLAGHPWATWHPQGKTEGSDFWPFWLGEILRGKEIDVNVWSFGYEAPGLKYS GQGISRFDQASYLLESIEVDHIGASPFIFVTHSLGGLIVK
Sequences:
>Translated_120_residues MTKHNQIGLFRIFDCQNSDSIGDIVFVHGLAGHPWATWHPQGKTEGSDFWPFWLGEILRGKEIDVNVWSFGYEAPGLKYS GQGISRFDQASYLLESIEVDHIGASPFIFVTHSLGGLIVK >Mature_119_residues TKHNQIGLFRIFDCQNSDSIGDIVFVHGLAGHPWATWHPQGKTEGSDFWPFWLGEILRGKEIDVNVWSFGYEAPGLKYSG QGISRFDQASYLLESIEVDHIGASPFIFVTHSLGGLIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13422; Mature: 13291
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHNQIGLFRIFDCQNSDSIGDIVFVHGLAGHPWATWHPQGKTEGSDFWPFWLGEILRG CCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHCC KEIDVNVWSFGYEAPGLKYSGQGISRFDQASYLLESIEVDHIGASPFIFVTHSLGGLIVK CCCEEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEC >Mature Secondary Structure TKHNQIGLFRIFDCQNSDSIGDIVFVHGLAGHPWATWHPQGKTEGSDFWPFWLGEILRG CCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHCC KEIDVNVWSFGYEAPGLKYSGQGISRFDQASYLLESIEVDHIGASPFIFVTHSLGGLIVK CCCEEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA