Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475395

Identifier: 113475395

GI number: 113475395

Start: 2613761

End: 2614414

Strand: Reverse

Name: 113475395

Synonym: Tery_1719

Alternate gene names: NA

Gene position: 2614414-2613761 (Counterclockwise)

Preceding gene: 113475396

Following gene: 113475394

Centisome position: 33.73

GC content: 38.53

Gene sequence:

>654_bases
TTGGCTAATTTAATTGAGAATATAGGTTTTTTGACTAAACCTAGGGTAAATGTTGAGGAGTTAAAAGAACATTCACCTCA
TTTGCGAGATTTGAATCAATGGTATCGACAAAATACTGGGCGGTTGGGAATTCTAACTAAGGTGTTTTATGAAACTAAGC
CTATGGGTGGGGTTTTGGTTGTGAATGAGGATAGTGCTGATCCTGGAATTACGGATGTTCACTCTATTGCTGTTCCTGCG
GATCACGTTTCTATTGCTAAAGCTGGCAAGAATGATTTGGTTTATGTTTCTACAATAAGGTTCTGTGAAAAAGTTTTTAC
TGCTGAGAAGAATACTCAAGTTTCAAAAAGTATACCTGAAAATTTTCGTCGCAGACGAGGAGCTAAGAGGTTTGTTGGTA
GGGATGAGGTCATAAGGACTTTGCACGAACAGTTGCGAGCAACTGAAATGGTGGCTATTTCTTCTGTTAGTGGTATGGCT
GGTATTGGTAAGACTGAAGTTGCTCTCCAATATGCTTATTTTCATTGGGAACAAAGTACATACGCTGGTGGTATATGTTG
GTTGGAATGTCGTGGGCAGAATGTGGGGGTTCAAATTATTAGTTTTGCTATGTCTGAATTTAATTTCAGTTTTTCTAAGG
ATGATGACTTGTAG

Upstream 100 bases:

>100_bases
ATAGGTAATTCGTACTGCTCAAAATTTTCCTCAGTATCAAGGTATTCTTCGACATATTAAGGGAATTGTCTTTTTATCTA
CTCCACACAGGGGAATTCAT

Downstream 100 bases:

>100_bases
AGTCGGATAGATTTTTGTTGGCGTCATTGGCAGGATGGTGATGTACTGCTGATTTTTGATGATGTTGTTAATTATGAAGA
TATTTCAGATTTTTTACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MANLIENIGFLTKPRVNVEELKEHSPHLRDLNQWYRQNTGRLGILTKVFYETKPMGGVLVVNEDSADPGITDVHSIAVPA
DHVSIAKAGKNDLVYVSTIRFCEKVFTAEKNTQVSKSIPENFRRRRGAKRFVGRDEVIRTLHEQLRATEMVAISSVSGMA
GIGKTEVALQYAYFHWEQSTYAGGICWLECRGQNVGVQIISFAMSEFNFSFSKDDDL

Sequences:

>Translated_217_residues
MANLIENIGFLTKPRVNVEELKEHSPHLRDLNQWYRQNTGRLGILTKVFYETKPMGGVLVVNEDSADPGITDVHSIAVPA
DHVSIAKAGKNDLVYVSTIRFCEKVFTAEKNTQVSKSIPENFRRRRGAKRFVGRDEVIRTLHEQLRATEMVAISSVSGMA
GIGKTEVALQYAYFHWEQSTYAGGICWLECRGQNVGVQIISFAMSEFNFSFSKDDDL
>Mature_216_residues
ANLIENIGFLTKPRVNVEELKEHSPHLRDLNQWYRQNTGRLGILTKVFYETKPMGGVLVVNEDSADPGITDVHSIAVPAD
HVSIAKAGKNDLVYVSTIRFCEKVFTAEKNTQVSKSIPENFRRRRGAKRFVGRDEVIRTLHEQLRATEMVAISSVSGMAG
IGKTEVALQYAYFHWEQSTYAGGICWLECRGQNVGVQIISFAMSEFNFSFSKDDDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24417; Mature: 24286

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLIENIGFLTKPRVNVEELKEHSPHLRDLNQWYRQNTGRLGILTKVFYETKPMGGVLV
CCCHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCEEE
VNEDSADPGITDVHSIAVPADHVSIAKAGKNDLVYVSTIRFCEKVFTAEKNTQVSKSIPE
EECCCCCCCCCCHHHEECCCHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHH
NFRRRRGAKRFVGRDEVIRTLHEQLRATEMVAISSVSGMAGIGKTEVALQYAYFHWEQST
HHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHEEECCCC
YAGGICWLECRGQNVGVQIISFAMSEFNFSFSKDDDL
CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANLIENIGFLTKPRVNVEELKEHSPHLRDLNQWYRQNTGRLGILTKVFYETKPMGGVLV
CCHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCEEE
VNEDSADPGITDVHSIAVPADHVSIAKAGKNDLVYVSTIRFCEKVFTAEKNTQVSKSIPE
EECCCCCCCCCCHHHEECCCHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHH
NFRRRRGAKRFVGRDEVIRTLHEQLRATEMVAISSVSGMAGIGKTEVALQYAYFHWEQST
HHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHEEECCCC
YAGGICWLECRGQNVGVQIISFAMSEFNFSFSKDDDL
CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA