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The map label for this gene is isiA [H]

Identifier: 113475350

GI number: 113475350

Start: 2534182

End: 2535216

Strand: Reverse

Name: isiA [H]

Synonym: Tery_1667

Alternate gene names: 113475350

Gene position: 2535216-2534182 (Counterclockwise)

Preceding gene: 113475354

Following gene: 113475349

Centisome position: 32.71

GC content: 38.94

Gene sequence:

>1035_bases
ATGCAAACTTATGGTAGTCCAGAAGTTAAATACGATTGGTGGGCTGGAAATGCTCGCTTCGCTAAATTATCTGGTTTATT
CATATCTGCTCATGCAGGTCAAGCTGCTCTAATTACTTTTTGGGCTGGAGCATTTACTCTATTTGAAATATCTTTATATT
CCCCAGATTTACCTATGGGTGAACAGGGTTTAATCTTACTTCCTCACCTAGCAACTTTAGGCTTAGGTATTGGAAAAGGT
GGAGCAGTTGTAGACACTTATCCCTATTTTGTAGTTGGTATTGTACATCTAATTTCATCAGCAGTATTAGGAGCAGGAGC
ACTTTTTCACACCTTTAAAGCTCCAGCAAATTTAAAGGATGCAACAGGTCAAGCGAAGCAATTTCACTTTGAATGGGATG
ATCCAAAAAAGCTAGGTATTATCTTAGGCCATCACCTACTTTTCTTAGGATTTGGTGCTTTATTATTAGCAGCAAAAGCT
ATGTATTTCGATGGGCTTTATGATGCGACAACTCAAACAGTTCGTTTAGTAACAAATCCCACTCTCGATCCATTGGTAAT
ATATGGATATCAAACTCATTTCGCCACTGTTAATAGTTTAGAAGACCTAGTTGGAGGTCACATTTATGTGGGATTTATTC
TAGTTTTAGGTGGCATTTGGCACATTATTAAGGAACCCCTTCCTTGGGCAAAACGGGTTCTCATCTTCTCTGGTGAAGCA
ATTCTTTCTTACTCTCTAGGTGGAATTGCCCTAGCAGGGTTTGTTGCAACTTATTTCTGTGCTGTTAATACTTTGGCTTA
TCCTGTAGAATTTTACGGTCCTGTTTTGGATATTAAGTTAGGAATTACTCCTTATTTTGCCGACAGTGTCAAGTTGCCTA
ATGGTGCTCATACTGCTCGTTGTTGGTTGACAAATGCTCATTTCTTCTTATCGTTCTTTTTCTTGCAAGGTCATTTATGG
CACGCTCTGAGAGCTATAGGTTTTGACTTTAAGCGCGTAGAAGATGCTTTGAATGGCGTAGCAGAAGAATCTTAA

Upstream 100 bases:

>100_bases
TTGAATAATATTGAACATTAACAGCGACTAATTATTGTATAAAAATTAGTATTTACTGTTTCGATAAACTATTGATTATA
ATTCAAAGAGGCAAAACTTA

Downstream 100 bases:

>100_bases
TCTAATTTACCTGTTTGAGATTTGGAGTTTTTAAGTGTGATTTGTCAAATTCCAACTTTCAAACTATGTATCTGGAAAGC
TTACAGTAGGGAGAGCGTAG

Product: photosystem antenna protein-like protein

Products: NA

Alternate protein names: CP43' [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MQTYGSPEVKYDWWAGNARFAKLSGLFISAHAGQAALITFWAGAFTLFEISLYSPDLPMGEQGLILLPHLATLGLGIGKG
GAVVDTYPYFVVGIVHLISSAVLGAGALFHTFKAPANLKDATGQAKQFHFEWDDPKKLGIILGHHLLFLGFGALLLAAKA
MYFDGLYDATTQTVRLVTNPTLDPLVIYGYQTHFATVNSLEDLVGGHIYVGFILVLGGIWHIIKEPLPWAKRVLIFSGEA
ILSYSLGGIALAGFVATYFCAVNTLAYPVEFYGPVLDIKLGITPYFADSVKLPNGAHTARCWLTNAHFFLSFFFLQGHLW
HALRAIGFDFKRVEDALNGVAEES

Sequences:

>Translated_344_residues
MQTYGSPEVKYDWWAGNARFAKLSGLFISAHAGQAALITFWAGAFTLFEISLYSPDLPMGEQGLILLPHLATLGLGIGKG
GAVVDTYPYFVVGIVHLISSAVLGAGALFHTFKAPANLKDATGQAKQFHFEWDDPKKLGIILGHHLLFLGFGALLLAAKA
MYFDGLYDATTQTVRLVTNPTLDPLVIYGYQTHFATVNSLEDLVGGHIYVGFILVLGGIWHIIKEPLPWAKRVLIFSGEA
ILSYSLGGIALAGFVATYFCAVNTLAYPVEFYGPVLDIKLGITPYFADSVKLPNGAHTARCWLTNAHFFLSFFFLQGHLW
HALRAIGFDFKRVEDALNGVAEES
>Mature_344_residues
MQTYGSPEVKYDWWAGNARFAKLSGLFISAHAGQAALITFWAGAFTLFEISLYSPDLPMGEQGLILLPHLATLGLGIGKG
GAVVDTYPYFVVGIVHLISSAVLGAGALFHTFKAPANLKDATGQAKQFHFEWDDPKKLGIILGHHLLFLGFGALLLAAKA
MYFDGLYDATTQTVRLVTNPTLDPLVIYGYQTHFATVNSLEDLVGGHIYVGFILVLGGIWHIIKEPLPWAKRVLIFSGEA
ILSYSLGGIALAGFVATYFCAVNTLAYPVEFYGPVLDIKLGITPYFADSVKLPNGAHTARCWLTNAHFFLSFFFLQGHLW
HALRAIGFDFKRVEDALNGVAEES

Specific function: Functions as an antenna for photosystem I (PSI) under iron-limiting conditions, when phycobilisomes disappear. Also functions as a dissipator of light energy, protecting cells from excessive light under iron-deficient conditions. Sequesters chlorophyll wh

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein. Note=Probably the major component of the CPVI-4 chlorophyll-protein complex [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbB/psbC family. IsiA/pcb subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000932 [H]

Pfam domain/function: PF00421 PSII [H]

EC number: NA

Molecular weight: Translated: 37506; Mature: 37506

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTYGSPEVKYDWWAGNARFAKLSGLFISAHAGQAALITFWAGAFTLFEISLYSPDLPMG
CCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCEEEEHHHHHHEEEEEEEEECCCCCCC
EQGLILLPHLATLGLGIGKGGAVVDTYPYFVVGIVHLISSAVLGAGALFHTFKAPANLKD
CCCCEEECCHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC
ATGQAKQFHFEWDDPKKLGIILGHHLLFLGFGALLLAAKAMYFDGLYDATTQTVRLVTNP
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECC
TLDPLVIYGYQTHFATVNSLEDLVGGHIYVGFILVLGGIWHIIKEPLPWAKRVLIFSGEA
CCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCE
ILSYSLGGIALAGFVATYFCAVNTLAYPVEFYGPVLDIKLGITPYFADSVKLPNGAHTAR
EEEECCCHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCEEECCCEECCCCCCEEE
CWLTNAHFFLSFFFLQGHLWHALRAIGFDFKRVEDALNGVAEES
EEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQTYGSPEVKYDWWAGNARFAKLSGLFISAHAGQAALITFWAGAFTLFEISLYSPDLPMG
CCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCEEEEHHHHHHEEEEEEEEECCCCCCC
EQGLILLPHLATLGLGIGKGGAVVDTYPYFVVGIVHLISSAVLGAGALFHTFKAPANLKD
CCCCEEECCHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC
ATGQAKQFHFEWDDPKKLGIILGHHLLFLGFGALLLAAKAMYFDGLYDATTQTVRLVTNP
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECC
TLDPLVIYGYQTHFATVNSLEDLVGGHIYVGFILVLGGIWHIIKEPLPWAKRVLIFSGEA
CCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCE
ILSYSLGGIALAGFVATYFCAVNTLAYPVEFYGPVLDIKLGITPYFADSVKLPNGAHTAR
EEEECCCHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCEEECCCEECCCCCCEEE
CWLTNAHFFLSFFFLQGHLWHALRAIGFDFKRVEDALNGVAEES
EEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3141374; 8022940; 12460685 [H]