Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475288

Identifier: 113475288

GI number: 113475288

Start: 2442907

End: 2445636

Strand: Direct

Name: 113475288

Synonym: Tery_1597

Alternate gene names: NA

Gene position: 2442907-2445636 (Clockwise)

Preceding gene: 113475287

Following gene: 113475290

Centisome position: 31.52

GC content: 32.86

Gene sequence:

>2730_bases
ATGGAAGAAACCTGGCAAGTACTACTAAAGCAAAAAATAGAAAATAAATACATTCAAAACCCTAACGCTAAAGAATGGGT
TGATGTAAATTTTTCCACCTCAGGTTTGCTCAATTTAACTTTAGTTAGTAATAACTTTTTTGGTTTATCTATCCCTAAAC
GGAAAGAAGAAATCTCCAACTTGCTAAAATCTCAAGCGCCTCATTTATCTCCTGGGTTTCTTTCCTTATATACACCTCAA
GAAGCTGAATCATTAAATATTTCACCTCCACAAATCTCTGATACACTCTCGCCCATTGATTGGCAAGATTTAGCTAATCA
GGCAGCAAACCCACAAGATCAACCTCAACTACCCCAGCAAGAACCCAGTACACCCAGAACAGTAACATTTTATTCTTTTA
AAGGAGGAGTAGGTCGGACTACTGCATTAACTCATGTGGCTTCAATTTTAGCCATGCGAGGCCATAAAGTTGTAGCTATA
GACTTAGATTTAGAAGCACCTGGGTTAACTACAGCATTTAAGCTTAAGCAACAGCCAAAATATGGAATAGTTGATTATTT
CTACGAACGTTCCTACTTACCAGATGAAGTAGACCCCAGTGTTTTAATTACAGAAATATTTGGTGAGGCAAAAATACCTA
ATGCTACAGGGAGAGTATTTGTTGTTCCTGCTGGATATCTTAGTCTTGATTATATGTCTAAAGTTGGCGATCTTTATGCC
ACAACTGTTATAGATGGAAATCAAAATCTTTGGTCTATTTTTAAGCAGGAAATTCAGGAACAATTAAAACCAGATTTTCT
CTTAATTGACTCAAGAACTGGAATTAATCAATGGAGTGCTTTATCATTAATTCAAGCTGCTGATGAAGCAATTATTTTTC
TTTTCCCTAACGAACAAAACAAACAGGGAATGGAGTTAATACTAAAATCTCTTCAAAGTCTGAAAAATCTATCCATTAAT
TTTGTTTTTTCCCCTGTACCTGATGTAGCAAAAAGTGGTTTAGATAAAGTTAAAAAAATTTGGAATTTTTTGCTTGAAAG
CATACAAAATCCAAAAGATGAAAAGTATGATACTGATGATGATGATGATGATGATTCAAATACAACTAATGACATATCAG
AAAATAACGATGAATTATTAGTAGTGCCTTACCTTGAAACAATTGCTTTAGCTGATAGCTATCCCATACCACATATACAG
AATTACTATAGTAAAATTGCCAATCTAATTGATGCCAAAACTAATGAAATTAAACGCAGCAGTATTTTTAATACTAGTGA
ACAAAGATGGCAAATTATTGAAAGTCTCGAGTTTGCTGAAGTAAATGCGGCTGACCAGAAGCAGGACCTAGGATTATTGT
TTCAACGTACTACTGATTTTGACAAATTTTTAGACGATACAACCTGTCTAATTAGAGGAAAAAAAGGAACAGGTAAAACT
GCTCTATATTGGCTATTTTTACAACATCAAGAAGTCGCTCAAAAATTAGCTTACAGAGGGTTAGATAATATTAATACTAA
ATTTGAATTTTTCTCAGGACACGGTAGATTTCAAAAAAGTCGTCCAACCCGTGATGAATTTCAATATATTCATCAAAAAT
TGCAGGAAAATAATGGGACATGGGAAGCTTTTTGGAGAGCTTATTTACTATTTAGATGTTATCAGGAAAGATTACTAAAA
TTTCCCAGAGGTAAGAAAGGAGAAAAGTTTAGTGAGTTAAAAAAAATCATAAATAATTTACCAAAAGATAGATGGGAGGC
GCAATCAACAACTGAAGCTTTATTAGAATTATCTACCAACTCTCAATTGATACTTACAGTCAAAGAAGCAATAGAGATTA
TTCTTAATCAAGAGGCGAAAAAAAATTCTAAAAAATACTGGTTTCTTTATGATGACTTAGATGAAGATTTTCCAAAAGCA
GAAGAATTAGGACAACAAGCATTAACTGGATTATTTCAATTAGTTCAGTCTTGTGATGCGAGTAGACTAACAGAAATTAG
ATTTAAAATTTTCTTGAGAGAAGATATTTGGAATCGTTTAATTTTTGATAATAAAAGTCATTTTACGGGAAGGGAGATTA
TTTTACAGTGGAGTTCAATAGACTTTTTACGTTTAGCCCTTCGTCAAGCAATACAATCTAAAAAATTCAAAGATTTAGTT
GACCGAGTTTATCCTGTTGCTATTGACAGAATAGATCAAGCTAGTGAAGAAGAGCTTGAGCAAGCATTAGAATTACTTTG
GGGAAGTCGTCGCCGACGAGGAAATAGAGCGAAAAAAGTATCTCAATGGGTTTATGAAAGATTAACAGACTTAAGTGGCA
CGACTTTTCCTCGGAGTTTAAGTATATTACTTAAAGAAGCAAAAGAAAAAGAATTAAGTAATAAAGGAAAGTCATCAACT
AAAATTCGTACAGACCGTCTCTTTCAAGGAAAATCTCTAGAATTAGGGTTAAAAAAAGCATCAGAAAAGCGATGTGAAGA
AATTAAAGAGGAATATCCAAACTATATTAATTTCTTTGATTCTCTTAACGGAAAACTAGCTTTGTTAAAAAAAGAAGAAT
TGAAAGCAATATGGAAGGATTCGGCAGAGGATATTGTCGGAAATTTTGAAGAATTTGCTTCTTTGTTAAGTGAAATAGGT
ATGATTGAATTTCGGGAGAAAGAAGAATGCTATAAATTTGCGGATATATATATTTATGGTTTTAATATGATTCGTAAAGG
AACAATATAG

Upstream 100 bases:

>100_bases
ATTGAAGCTGACAATATAAATTATGAAAGCTGGTTTAAAACATATACAAGGCTTATAGAATGGCTACAAAAACAAGCCAC
TATACTTTAAGGAGGTTGAA

Downstream 100 bases:

>100_bases
AAATTTGTAAGCAAGCACACAAAATTAATTACTCCTATATGTAAGATTGAACTTTTTATACTATAAACTATCATTCAAAA
TAGAGTAGGTAAATAACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 909; Mature: 909

Protein sequence:

>909_residues
MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISNLLKSQAPHLSPGFLSLYTPQ
EAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQEPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAI
DLDLEAPGLTTAFKLKQQPKYGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA
TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQNKQGMELILKSLQSLKNLSIN
FVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDDDDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQ
NYYSKIANLIDAKTNEIKRSSIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT
ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGTWEAFWRAYLLFRCYQERLLK
FPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTNSQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKA
EELGQQALTGLFQLVQSCDASRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV
DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSLSILLKEAKEKELSNKGKSST
KIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFDSLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIG
MIEFREKEECYKFADIYIYGFNMIRKGTI

Sequences:

>Translated_909_residues
MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISNLLKSQAPHLSPGFLSLYTPQ
EAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQEPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAI
DLDLEAPGLTTAFKLKQQPKYGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA
TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQNKQGMELILKSLQSLKNLSIN
FVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDDDDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQ
NYYSKIANLIDAKTNEIKRSSIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT
ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGTWEAFWRAYLLFRCYQERLLK
FPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTNSQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKA
EELGQQALTGLFQLVQSCDASRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV
DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSLSILLKEAKEKELSNKGKSST
KIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFDSLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIG
MIEFREKEECYKFADIYIYGFNMIRKGTI
>Mature_909_residues
MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISNLLKSQAPHLSPGFLSLYTPQ
EAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQEPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAI
DLDLEAPGLTTAFKLKQQPKYGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA
TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQNKQGMELILKSLQSLKNLSIN
FVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDDDDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQ
NYYSKIANLIDAKTNEIKRSSIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT
ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGTWEAFWRAYLLFRCYQERLLK
FPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTNSQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKA
EELGQQALTGLFQLVQSCDASRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV
DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSLSILLKEAKEKELSNKGKSST
KIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFDSLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIG
MIEFREKEECYKFADIYIYGFNMIRKGTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104772; Mature: 104772

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISN
CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEECCEEECCCCHHHHHHHH
LLKSQAPHLSPGFLSLYTPQEAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQ
HHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
EPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAIDLDLEAPGLTTAFKLKQQPK
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCC
YGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA
CCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHEE
TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQN
EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCC
KQGMELILKSLQSLKNLSINFVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDD
CHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQNYYSKIANLIDAKTNEIKRS
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCE
ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGT
EEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCH
WEAFWRAYLLFRCYQERLLKFPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
SQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKAEELGQQALTGLFQLVQSCDA
CEEEEEHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
SRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHH
DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH
SILLKEAKEKELSNKGKSSTKIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFD
HHHHHHHHHHHHHCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIGMIEFREKEECYKFADIYIYG
CCCCCEEEEEHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCEEECCHHHHHHHHHEEEEE
FNMIRKGTI
EHHHHCCCC
>Mature Secondary Structure
MEETWQVLLKQKIENKYIQNPNAKEWVDVNFSTSGLLNLTLVSNNFFGLSIPKRKEEISN
CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEECCEEECCCCHHHHHHHH
LLKSQAPHLSPGFLSLYTPQEAESLNISPPQISDTLSPIDWQDLANQAANPQDQPQLPQQ
HHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
EPSTPRTVTFYSFKGGVGRTTALTHVASILAMRGHKVVAIDLDLEAPGLTTAFKLKQQPK
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCC
YGIVDYFYERSYLPDEVDPSVLITEIFGEAKIPNATGRVFVVPAGYLSLDYMSKVGDLYA
CCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHEE
TTVIDGNQNLWSIFKQEIQEQLKPDFLLIDSRTGINQWSALSLIQAADEAIIFLFPNEQN
EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCC
KQGMELILKSLQSLKNLSINFVFSPVPDVAKSGLDKVKKIWNFLLESIQNPKDEKYDTDD
CHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DDDDDSNTTNDISENNDELLVVPYLETIALADSYPIPHIQNYYSKIANLIDAKTNEIKRS
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SIFNTSEQRWQIIESLEFAEVNAADQKQDLGLLFQRTTDFDKFLDDTTCLIRGKKGTGKT
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCE
ALYWLFLQHQEVAQKLAYRGLDNINTKFEFFSGHGRFQKSRPTRDEFQYIHQKLQENNGT
EEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCH
WEAFWRAYLLFRCYQERLLKFPRGKKGEKFSELKKIINNLPKDRWEAQSTTEALLELSTN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
SQLILTVKEAIEIILNQEAKKNSKKYWFLYDDLDEDFPKAEELGQQALTGLFQLVQSCDA
CEEEEEHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
SRLTEIRFKIFLREDIWNRLIFDNKSHFTGREIILQWSSIDFLRLALRQAIQSKKFKDLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHH
DRVYPVAIDRIDQASEEELEQALELLWGSRRRRGNRAKKVSQWVYERLTDLSGTTFPRSL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH
SILLKEAKEKELSNKGKSSTKIRTDRLFQGKSLELGLKKASEKRCEEIKEEYPNYINFFD
HHHHHHHHHHHHHCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLNGKLALLKKEELKAIWKDSAEDIVGNFEEFASLLSEIGMIEFREKEECYKFADIYIYG
CCCCCEEEEEHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCEEECCHHHHHHHHHEEEEE
FNMIRKGTI
EHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA