| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475231
Identifier: 113475231
GI number: 113475231
Start: 2335843
End: 2336226
Strand: Direct
Name: 113475231
Synonym: Tery_1538
Alternate gene names: NA
Gene position: 2335843-2336226 (Clockwise)
Preceding gene: 113475230
Following gene: 113475232
Centisome position: 30.14
GC content: 29.17
Gene sequence:
>384_bases GTGACAGGATGCAGCATGTTAATCAACATGAATAACTTTGAAAAATGCCCTGAGTTTGATGAGGATTATTTTTTATACTA CGAGGATTTTGACTTTTGTAGACGCTATAAAAAACAAGGTCATAAAATAGCTATTACTCAAACAATATCTGTAATTCATC AACCATCTTCTATTACTAGTAAACAACCAGGATTAAAACTTGAGTATAGCATATATAGCTACCTGTTGAGTTTAGCAAAA CATACAAATAAATTAGTTTTAATATATAGATTACTTAGAATTACAATAGCTGCTTTAGTTAGCCTACTAATAGATTATAA AATAGCTCGTGTTAAAATCAAAGCGATATCGAAATTTATCAGATGTAATCGTAGGTTTTTGTAG
Upstream 100 bases:
>100_bases AGGTAAAGTTTGGTTTGGTGGCGGGAATTTTATTCCTGAAACTGGAAAAATAATTGCTAATAATTTTTTTTACAAGACAG AAACATCAATCACAGATTGG
Downstream 100 bases:
>100_bases AGCTAAGTTAAAGCCAAAAAACTATGATGTAATTGGATAAATTTTGGCCTGATCTGAACCTTGAAGTAAAAATGTTGGGT TGCCCTGGGATATATTGCTG
Product: glycosyltransferase
Products: NA
Alternate protein names: Family 2 Glycosyl Transferase; Glycosyltransferase
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTGCSMLINMNNFEKCPEFDEDYFLYYEDFDFCRRYKKQGHKIAITQTISVIHQPSSITSKQPGLKLEYSIYSYLLSLAK HTNKLVLIYRLLRITIAALVSLLIDYKIARVKIKAISKFIRCNRRFL
Sequences:
>Translated_127_residues MTGCSMLINMNNFEKCPEFDEDYFLYYEDFDFCRRYKKQGHKIAITQTISVIHQPSSITSKQPGLKLEYSIYSYLLSLAK HTNKLVLIYRLLRITIAALVSLLIDYKIARVKIKAISKFIRCNRRFL >Mature_126_residues TGCSMLINMNNFEKCPEFDEDYFLYYEDFDFCRRYKKQGHKIAITQTISVIHQPSSITSKQPGLKLEYSIYSYLLSLAKH TNKLVLIYRLLRITIAALVSLLIDYKIARVKIKAISKFIRCNRRFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14984; Mature: 14853
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGCSMLINMNNFEKCPEFDEDYFLYYEDFDFCRRYKKQGHKIAITQTISVIHQPSSITS CCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCC KQPGLKLEYSIYSYLLSLAKHTNKLVLIYRLLRITIAALVSLLIDYKIARVKIKAISKFI CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCNRRFL HHCCCCC >Mature Secondary Structure TGCSMLINMNNFEKCPEFDEDYFLYYEDFDFCRRYKKQGHKIAITQTISVIHQPSSITS CCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCC KQPGLKLEYSIYSYLLSLAKHTNKLVLIYRLLRITIAALVSLLIDYKIARVKIKAISKFI CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCNRRFL HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA