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The map label for this gene is hxuB [H]

Identifier: 113475226

GI number: 113475226

Start: 2324538

End: 2326616

Strand: Reverse

Name: hxuB [H]

Synonym: Tery_1533

Alternate gene names: 113475226

Gene position: 2326616-2324538 (Counterclockwise)

Preceding gene: 113475229

Following gene: 113475225

Centisome position: 30.02

GC content: 35.59

Gene sequence:

>2079_bases
ATGTTAAAGATTATCACATTAATTTCTAGTACATTTATAATTATTTCCTTATTGGATAATCAAGCTATCTCCAAAACTAC
TGATGTTGATAAATTATTGAATCAAACTTCACTAACCACTAACAAAAAAAATATTTCATCATTCAAAAAATATAAATTAA
CATCAGCATTAAGTTCTCAATTGATTGACAAATCTGGACAGAAAAAAGTTAATTACAAAAGTTTAATATCTCAATTAAAA
AAAATAGAAAAAATAAAATTAATCCCAGATTTAAAAGTTTATCCTATAGAAAAAAACATCACACAAACTTTACCCAATAG
TCAGCAAATACTTACTTCCTTTGAAATTATTAATACTTTAAATACCAGCCAACCAAAATATACTCAAAAGACTCAAAATC
CACCAAGACCACCAGAATCACTAGAAAATCCCCGACCAGATCCAAATCGCGATCGCTTCCTCCAACCCCTTCCCCAACCA
ACCATACCAGAAATTCCCAAAGATAAGGAACTAAAAAAAACACCACCACCTCAACCTCTACGACAAGACCAAAAGCAACT
AAATCAGAAAATTCCCGTGCAGAGAGTTTTAGTAAATGGAAGTACAATTTTTACCCCACAAGAAATTAAGACTCTTGTTG
AACCATATGAAGGGCGTAAGGCTACTCTATTAGAACTTCAGCAACTAGCAGATAAAATTACCGAAATCTATCTAGAACTT
GGCTATATTACCTCAAGAGCAATTCTACCTCCCCAAAACATTAGGGAGGGAGTAGTTAGGATTGAAATTATAGAGGGCAT
TTTAGGAGAAATCAAAATTGAAGGTACAAAAAGATTACACAATTCCTATATAGCAAGTCGGATACAACTTGGGGCGGGAA
AACCATTGGACACCGGTAGACTAGAAAATCAATTACGGTTACTTCGGGCGAATCCTTTATTTGAAAATATTGAAGCTAGT
TTGCAAACTAGTGAAACCCTAGGGGAAAGTATTCTTATTGTTCGTATCAAAGAAAAAAATCCCTTAGAGTTGAGTATGAA
TACTGATAACTATTCTAATCCCAGCGTAGGTTCTGAACGAACTGGTTGGACTGCACTACATCGTAACCTAACTGGGAGAG
GCGATTTTTTTGTGGCATCTTATAACACTACTAGGCTATTTGACGATGAATCAGATGTTTTTGACTTTATTTATAATTTG
CCTATTAACTCCATGAATGGTACTTTGCAGGCAAGAGTTGCCCCTAACAGTAATAGAGTTGGCCAAGATTTTGAAGATAT
TGAAATTAGTAGCACAACAGATGTATATGAATTGAGTTACCGTCAACCTATATTGAGAAAACCGAAACAAGAATTTGCCT
TGTCTCTCGGTTTGAGTTATCAGCGCACAAAAACTTTCCTCAACGATGAACCTTTTAATTTTACAGCAGATACAGATAAC
ACTGATAATGATGGTATTAATAGTACTACTGTGATTAGATTGGGACAGGATTATATTCTCCGAGATCCTCAAGGTGCTTG
GGCTTTGCGATCGCAATTCAATATTGGTACTGGTTTATTTGATGCTACTGTCAGGAAGGATTCACAACCTGATGGACATT
TCTTGAATTGGCTAGGCCAAGTACAAAGAGTACAAAGATTAAGTAGTAATCATTTATTGATTGTCCAGGGAGATTTGCAA
TTGTCCTCAACTAGTTTATTGCCATATCAACAATTTATTATTGGTGGTGCTTTGTCCTTACGAGGCTATCAGCAGAATGT
CAGGTCTGGAGATAATGGTTTTAGATTTTCTATTGAGGACAGAATTACAGTTTATCGAGATGAGTCTGGTTTGCCATTGA
TACAGTTTACTCCTTTTCTAGATATTGGAGCTGTTTGGGATGATAGTAGTAATCCTAATAGTGACTCAAAACCCAACCAA
AGATTTTTGGCTGGAGCTGGAATAGGTTTGATTTGGCAACTTGTGCCACAAGTCGATCTACGCTTAGACTATGGTTTACC
TTTGGTGCACTTAGATGATCGTAGCAATAATGCTCAGGATTCCGGATTTTATTTCAGTGTAATTGTTCGGCCGTTCTGA

Upstream 100 bases:

>100_bases
CTCTTTAGTATACTTAATATTATCCCATAAACTTAAGAGGGATCAAGTATTTTATTTTTTTGTAAGTCAAATCAAAAAAA
CCAAGATAGTAACTATTATC

Downstream 100 bases:

>100_bases
AGAAACTCAGAACTCAGAATTCAGAAGTTAAAAAGTAGTCTTGCACAATAGGACTCTGAGGTAAAACTGGACTTAAAGCC
TCCTCCATCCATCGGGCAAC

Product: polypeptide-transport-associated, ShlB-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MLKIITLISSTFIIISLLDNQAISKTTDVDKLLNQTSLTTNKKNISSFKKYKLTSALSSQLIDKSGQKKVNYKSLISQLK
KIEKIKLIPDLKVYPIEKNITQTLPNSQQILTSFEIINTLNTSQPKYTQKTQNPPRPPESLENPRPDPNRDRFLQPLPQP
TIPEIPKDKELKKTPPPQPLRQDQKQLNQKIPVQRVLVNGSTIFTPQEIKTLVEPYEGRKATLLELQQLADKITEIYLEL
GYITSRAILPPQNIREGVVRIEIIEGILGEIKIEGTKRLHNSYIASRIQLGAGKPLDTGRLENQLRLLRANPLFENIEAS
LQTSETLGESILIVRIKEKNPLELSMNTDNYSNPSVGSERTGWTALHRNLTGRGDFFVASYNTTRLFDDESDVFDFIYNL
PINSMNGTLQARVAPNSNRVGQDFEDIEISSTTDVYELSYRQPILRKPKQEFALSLGLSYQRTKTFLNDEPFNFTADTDN
TDNDGINSTTVIRLGQDYILRDPQGAWALRSQFNIGTGLFDATVRKDSQPDGHFLNWLGQVQRVQRLSSNHLLIVQGDLQ
LSSTSLLPYQQFIIGGALSLRGYQQNVRSGDNGFRFSIEDRITVYRDESGLPLIQFTPFLDIGAVWDDSSNPNSDSKPNQ
RFLAGAGIGLIWQLVPQVDLRLDYGLPLVHLDDRSNNAQDSGFYFSVIVRPF

Sequences:

>Translated_692_residues
MLKIITLISSTFIIISLLDNQAISKTTDVDKLLNQTSLTTNKKNISSFKKYKLTSALSSQLIDKSGQKKVNYKSLISQLK
KIEKIKLIPDLKVYPIEKNITQTLPNSQQILTSFEIINTLNTSQPKYTQKTQNPPRPPESLENPRPDPNRDRFLQPLPQP
TIPEIPKDKELKKTPPPQPLRQDQKQLNQKIPVQRVLVNGSTIFTPQEIKTLVEPYEGRKATLLELQQLADKITEIYLEL
GYITSRAILPPQNIREGVVRIEIIEGILGEIKIEGTKRLHNSYIASRIQLGAGKPLDTGRLENQLRLLRANPLFENIEAS
LQTSETLGESILIVRIKEKNPLELSMNTDNYSNPSVGSERTGWTALHRNLTGRGDFFVASYNTTRLFDDESDVFDFIYNL
PINSMNGTLQARVAPNSNRVGQDFEDIEISSTTDVYELSYRQPILRKPKQEFALSLGLSYQRTKTFLNDEPFNFTADTDN
TDNDGINSTTVIRLGQDYILRDPQGAWALRSQFNIGTGLFDATVRKDSQPDGHFLNWLGQVQRVQRLSSNHLLIVQGDLQ
LSSTSLLPYQQFIIGGALSLRGYQQNVRSGDNGFRFSIEDRITVYRDESGLPLIQFTPFLDIGAVWDDSSNPNSDSKPNQ
RFLAGAGIGLIWQLVPQVDLRLDYGLPLVHLDDRSNNAQDSGFYFSVIVRPF
>Mature_692_residues
MLKIITLISSTFIIISLLDNQAISKTTDVDKLLNQTSLTTNKKNISSFKKYKLTSALSSQLIDKSGQKKVNYKSLISQLK
KIEKIKLIPDLKVYPIEKNITQTLPNSQQILTSFEIINTLNTSQPKYTQKTQNPPRPPESLENPRPDPNRDRFLQPLPQP
TIPEIPKDKELKKTPPPQPLRQDQKQLNQKIPVQRVLVNGSTIFTPQEIKTLVEPYEGRKATLLELQQLADKITEIYLEL
GYITSRAILPPQNIREGVVRIEIIEGILGEIKIEGTKRLHNSYIASRIQLGAGKPLDTGRLENQLRLLRANPLFENIEAS
LQTSETLGESILIVRIKEKNPLELSMNTDNYSNPSVGSERTGWTALHRNLTGRGDFFVASYNTTRLFDDESDVFDFIYNL
PINSMNGTLQARVAPNSNRVGQDFEDIEISSTTDVYELSYRQPILRKPKQEFALSLGLSYQRTKTFLNDEPFNFTADTDN
TDNDGINSTTVIRLGQDYILRDPQGAWALRSQFNIGTGLFDATVRKDSQPDGHFLNWLGQVQRVQRLSSNHLLIVQGDLQ
LSSTSLLPYQQFIIGGALSLRGYQQNVRSGDNGFRFSIEDRITVYRDESGLPLIQFTPFLDIGAVWDDSSNPNSDSKPNQ
RFLAGAGIGLIWQLVPQVDLRLDYGLPLVHLDDRSNNAQDSGFYFSVIVRPF

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 78218; Mature: 78218

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIITLISSTFIIISLLDNQAISKTTDVDKLLNQTSLTTNKKNISSFKKYKLTSALSSQ
CEEEEEEHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LIDKSGQKKVNYKSLISQLKKIEKIKLIPDLKVYPIEKNITQTLPNSQQILTSFEIINTL
HHCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHC
NTSQPKYTQKTQNPPRPPESLENPRPDPNRDRFLQPLPQPTIPEIPKDKELKKTPPPQPL
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
RQDQKQLNQKIPVQRVLVNGSTIFTPQEIKTLVEPYEGRKATLLELQQLADKITEIYLEL
HHHHHHHHHCCCEEEEEECCCEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
GYITSRAILPPQNIREGVVRIEIIEGILGEIKIEGTKRLHNSYIASRIQLGAGKPLDTGR
HHHHCCCCCCCHHHHHHHEEEEEHHHHHCCEEECHHHHHHHHHHHHHHCCCCCCCCCCHH
LENQLRLLRANPLFENIEASLQTSETLGESILIVRIKEKNPLELSMNTDNYSNPSVGSER
HHHHHHEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCC
TGWTALHRNLTGRGDFFVASYNTTRLFDDESDVFDFIYNLPINSMNGTLQARVAPNSNRV
CCHHHHHHCCCCCCCEEEEECCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
GQDFEDIEISSTTDVYELSYRQPILRKPKQEFALSLGLSYQRTKTFLNDEPFNFTADTDN
CCCHHCEEECCCCCEEEECCCCHHHHCCHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCC
TDNDGINSTTVIRLGQDYILRDPQGAWALRSQFNIGTGLFDATVRKDSQPDGHFLNWLGQ
CCCCCCCCEEEEEECCCEEEECCCCCEEHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHH
VQRVQRLSSNHLLIVQGDLQLSSTSLLPYQQFIIGGALSLRGYQQNVRSGDNGFRFSIED
HHHHHHHCCCCEEEEECCCEECCCCCCCHHHHHHCCHHEECHHHHHHCCCCCCEEEEEEC
RITVYRDESGLPLIQFTPFLDIGAVWDDSSNPNSDSKPNQRFLAGAGIGLIWQLVPQVDL
CEEEEECCCCCEEEEECCCEEECEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCEE
RLDYGLPLVHLDDRSNNAQDSGFYFSVIVRPF
EEECCCCEEEECCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MLKIITLISSTFIIISLLDNQAISKTTDVDKLLNQTSLTTNKKNISSFKKYKLTSALSSQ
CEEEEEEHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LIDKSGQKKVNYKSLISQLKKIEKIKLIPDLKVYPIEKNITQTLPNSQQILTSFEIINTL
HHCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHC
NTSQPKYTQKTQNPPRPPESLENPRPDPNRDRFLQPLPQPTIPEIPKDKELKKTPPPQPL
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
RQDQKQLNQKIPVQRVLVNGSTIFTPQEIKTLVEPYEGRKATLLELQQLADKITEIYLEL
HHHHHHHHHCCCEEEEEECCCEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
GYITSRAILPPQNIREGVVRIEIIEGILGEIKIEGTKRLHNSYIASRIQLGAGKPLDTGR
HHHHCCCCCCCHHHHHHHEEEEEHHHHHCCEEECHHHHHHHHHHHHHHCCCCCCCCCCHH
LENQLRLLRANPLFENIEASLQTSETLGESILIVRIKEKNPLELSMNTDNYSNPSVGSER
HHHHHHEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCC
TGWTALHRNLTGRGDFFVASYNTTRLFDDESDVFDFIYNLPINSMNGTLQARVAPNSNRV
CCHHHHHHCCCCCCCEEEEECCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
GQDFEDIEISSTTDVYELSYRQPILRKPKQEFALSLGLSYQRTKTFLNDEPFNFTADTDN
CCCHHCEEECCCCCEEEECCCCHHHHCCHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCC
TDNDGINSTTVIRLGQDYILRDPQGAWALRSQFNIGTGLFDATVRKDSQPDGHFLNWLGQ
CCCCCCCCEEEEEECCCEEEECCCCCEEHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHH
VQRVQRLSSNHLLIVQGDLQLSSTSLLPYQQFIIGGALSLRGYQQNVRSGDNGFRFSIED
HHHHHHHCCCCEEEEECCCEECCCCCCCHHHHHHCCHHEECHHHHHHCCCCCCEEEEEEC
RITVYRDESGLPLIQFTPFLDIGAVWDDSSNPNSDSKPNQRFLAGAGIGLIWQLVPQVDL
CEEEEECCCCCEEEEECCCEEECEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCEE
RLDYGLPLVHLDDRSNNAQDSGFYFSVIVRPF
EEECCCCEEEECCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]