| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475195
Identifier: 113475195
GI number: 113475195
Start: 2272168
End: 2275125
Strand: Reverse
Name: 113475195
Synonym: Tery_1496
Alternate gene names: NA
Gene position: 2275125-2272168 (Counterclockwise)
Preceding gene: 113475196
Following gene: 113475188
Centisome position: 29.36
GC content: 35.46
Gene sequence:
>2958_bases ATGGTAATAGCAATAGAAAAAGAATTAGAGGAAACTAAAGTCAAGTGGCAACAAACTCAGGAAGAGTTGGACAAAACTAA GTCAGAGTTGCATGATGTAAGGGAGGAGTTGGAGCGATCGCAATCTCAATTAGATGAGGTATTGGGAGAGTTGGAGCAAA CCCACTTTGAGTTACATCAGTTCAAAGAAAAAGGACAGCAACATCAATCTGAAGCCAATGGACAAGTTAAGCAGGAGTTG GCAGAAACTAAGGCCAAGTTGCAGGAGACAGAAAAGTTGTTGCAGGAGTCCCAGTCTCAAAAAGAAACAGAAGAATTTAA GGCCAAATGGCAAGAAACTCAGCAAAAGTTGGACAAAACTAAGTCAGAGTTCCATGATGTGAGGGAAGAGTTGGAGCGAT CGCAATCTCAATTAGATGAGGTATTGGGAGAGTTGGAGCAAACCCACTTTGAGTTACATCAGTTCAAAGAAAAAGGACAG CAACATCAATCTGAAGCCAATGGACAAGTTAAGCAGGAGTTGGCAGAAACTAAGGCCAAGTTGCAGGAGACTGAACAATT GCTAGAGGAGTCCCAGTCCCAGTTAGGTGAAATGATGGGAGTGTTAGAGGAGTATAAGTCTCAAATGGAGCAGACCATGG GGGCATTGGAGGAGTCCCAAGGGAAGTTGCAGCAGAAGCATGAAGAGCTGGAGCAGGTTAAGGGGGAGTTAGCAGAGAAG CAGTTGGGAGTAGAGTCAGAGTTGCACAAAGAGTTAGAGGAAACTAAGTCTCAGTGGCGAGAGACTGAGGAATTGTTGGA GAAATATCAGTCTCAGTTGGAGGAGACAATGGCAACATTGGAAGAGTCTTTGTCCCAACTAGATAGTAATCAGAAAGAGT TAGAACAGACTAAATTTGAGTTACACCAAGTTCAACAAACTGCAAAAAAAACACAGCCATCTGGTTTTTTATACCAAAAG ATAATATCTATAGACTCTAGCTGTCAAGAAGCTCATCAAAAAATTCAAGAACTATCTAAGACAAATAAAGAACAGATAGA TTATAGTGACGAATCCCGATTATTCAAAATTAACAATGCAGTTGTTAAACCAATTGAAATTAAGAGCAATTACGAATGGA TGGGAGGTGTTTGTTTTCCAGAGAATATGCCTGGAGTTTTTCGTCATCGACGCTCAGGGAAATTAGTAGGTAAAAATGAA CCTATATACATAGATAGACCAGAAATTGTCGATAATTCCAAAGAAGTAAATGTCATTGATAATAGTAAAAATCAAACCTA TAGTTCAAATTTTTATCAAGGTACATACATTTATGCAGGACCTTTAATATTTCATTTTGGACATGTTCTCACAGAAAGTA TCCATCGCATTTGGGCATTCAATCCCAAATTACATGATGGTTTAGTTTTTGCTTTACCTGTAGGGAGCAATTCAGCTTCA TTTAATCCTCCTCAATGGTTAATTCAAATCTTAAAAATTTTCAACATTTCTCTTGAAAAGTGCATTTTTGTGATATATAA CTGCACTTTTGAAAATTTGATTATTCCAGAACCAGGTAGCGAGCTGTCAGTAGGAGTCAAGGAATGGTATTGCTCATATC TAGAGAGACTACAGCAGAGAATTTTGGAGATGACTAATCAACTTAGAAAAGAGAAACAAGATTTAAAACTCTTTTTTGGT AGGTCTCATATTTTGCTTCGTGGGGGAGTAGCTGGGGAAAAATATTTGGAGAATTGTTTGTTGAATGAGGGTTATGTTTC TATCCAGCCGGAAAATTACAATATTCTAGAACAGTTATCTTATTTAATAAGTGCAAAAAAAATTATATTTGTGGAAGGAA GTGCTATATATCTGTTAGAGTTTCTGAGTTATTTAGAGGCAGATATTGTATGTATTCCCAGAAGAGGAAATAACGTTAAT TTTTATCCACATATTTATAATAAGTGTTCAAATTATATTATAGCTGGGGGTGTAGATAATGCTATGAGATTAGGAGCTTA TAATACTAAAGATGCGCCATATTCAATTTCCATAGCCAAAAATCCTTTTCAAATAGTTGAATCTCTGAGAAACCAAAATT TTGCTATCTTAGAAAACTGGAGAGAAGATGATTTCTTAGCTCAAGAAAATTCTGATGTAATGGCCTATATAGATAGAGGA TCTAAGTTATTAAAGAATCAAAATAAAGTTTATTGTTTGGCTGTAAAAGAAAAGTATTTAAAGATGCGAACTACATTAAA AGATAACTCCATTTCTAATATTTTTGAAAGTAAAGAGATTACAACCAGAGATGGTCGTCTTAACCAACTTGCTACTATAA ATGAATCATTTAGATATCTAGAAATAGGTGTATCTGAAGGTAAAACCTTTAATGCAATTAATATCAAATCTAAAGTAGCT GTAGATCCAAAATTTCAGTTTAATACAGGCGAATATGCTACTGAAAATATTAATTTTCTTGAAGTTGCTAGTGATGATTT TTTTAGGAATTACGCTCAGGAATATACTCCATTTGACCTTATTTACTTAGACGGTCTTCACACCTTTGAACAAAGTTTTC GTGACTTTTGTGCATCTATTGCTTGCTCACATTTAAAGACTATCTGGCTAATTGATGATACTTTTCCTGGAAGCTATGCT CAAGCTCAATCATCACATCAACGTTGCATATCTTTAAAAAAGGTTTCGGGGGAAAAAAATAAAAGCTGGATGGGTGATGT CTTTAAAGTTATTGCAGCTATTCATGATTTTTTCCCTCAGTATAGTTTTGCTCACTTTCCCCATCATGGTCAAACAGTTG TATGGAGTAAGTGGAGAGAAAATTTTAGACCTAAATGGAATTGCTTAGAAACTATTAGTCGCTTAGAGTATTCAGATTTT CTCGAACTACAAACCAGTTTATTTAAGAGAGAACCATACGAAAATATTTTTGAACGTATAAAAAAGGATTTGAATTAA
Upstream 100 bases:
>100_bases CAAACAAGTTGGAGTAAAATCAAGAATGGTGATAGTAAATTTTATTTTATCGACTAGATTATAGTTTGATTTATATTAAT AATTAAAGGAAAATAAGTTA
Downstream 100 bases:
>100_bases TCATAACTTTATTTGATATGTAGTTATGATTCTCTGTGACTTGGTTCAACTTAACTTGAGTTTTAGACTTAGCTAGTACT AACTATAAATTAACCCGAGA
Product: chromosome segregation ATPase-like protein
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 985; Mature: 985
Protein sequence:
>985_residues MVIAIEKELEETKVKWQQTQEELDKTKSELHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQQHQSEANGQVKQEL AETKAKLQETEKLLQESQSQKETEEFKAKWQETQQKLDKTKSEFHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQ QHQSEANGQVKQELAETKAKLQETEQLLEESQSQLGEMMGVLEEYKSQMEQTMGALEESQGKLQQKHEELEQVKGELAEK QLGVESELHKELEETKSQWRETEELLEKYQSQLEETMATLEESLSQLDSNQKELEQTKFELHQVQQTAKKTQPSGFLYQK IISIDSSCQEAHQKIQELSKTNKEQIDYSDESRLFKINNAVVKPIEIKSNYEWMGGVCFPENMPGVFRHRRSGKLVGKNE PIYIDRPEIVDNSKEVNVIDNSKNQTYSSNFYQGTYIYAGPLIFHFGHVLTESIHRIWAFNPKLHDGLVFALPVGSNSAS FNPPQWLIQILKIFNISLEKCIFVIYNCTFENLIIPEPGSELSVGVKEWYCSYLERLQQRILEMTNQLRKEKQDLKLFFG RSHILLRGGVAGEKYLENCLLNEGYVSIQPENYNILEQLSYLISAKKIIFVEGSAIYLLEFLSYLEADIVCIPRRGNNVN FYPHIYNKCSNYIIAGGVDNAMRLGAYNTKDAPYSISIAKNPFQIVESLRNQNFAILENWREDDFLAQENSDVMAYIDRG SKLLKNQNKVYCLAVKEKYLKMRTTLKDNSISNIFESKEITTRDGRLNQLATINESFRYLEIGVSEGKTFNAINIKSKVA VDPKFQFNTGEYATENINFLEVASDDFFRNYAQEYTPFDLIYLDGLHTFEQSFRDFCASIACSHLKTIWLIDDTFPGSYA QAQSSHQRCISLKKVSGEKNKSWMGDVFKVIAAIHDFFPQYSFAHFPHHGQTVVWSKWRENFRPKWNCLETISRLEYSDF LELQTSLFKREPYENIFERIKKDLN
Sequences:
>Translated_985_residues MVIAIEKELEETKVKWQQTQEELDKTKSELHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQQHQSEANGQVKQEL AETKAKLQETEKLLQESQSQKETEEFKAKWQETQQKLDKTKSEFHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQ QHQSEANGQVKQELAETKAKLQETEQLLEESQSQLGEMMGVLEEYKSQMEQTMGALEESQGKLQQKHEELEQVKGELAEK QLGVESELHKELEETKSQWRETEELLEKYQSQLEETMATLEESLSQLDSNQKELEQTKFELHQVQQTAKKTQPSGFLYQK IISIDSSCQEAHQKIQELSKTNKEQIDYSDESRLFKINNAVVKPIEIKSNYEWMGGVCFPENMPGVFRHRRSGKLVGKNE PIYIDRPEIVDNSKEVNVIDNSKNQTYSSNFYQGTYIYAGPLIFHFGHVLTESIHRIWAFNPKLHDGLVFALPVGSNSAS FNPPQWLIQILKIFNISLEKCIFVIYNCTFENLIIPEPGSELSVGVKEWYCSYLERLQQRILEMTNQLRKEKQDLKLFFG RSHILLRGGVAGEKYLENCLLNEGYVSIQPENYNILEQLSYLISAKKIIFVEGSAIYLLEFLSYLEADIVCIPRRGNNVN FYPHIYNKCSNYIIAGGVDNAMRLGAYNTKDAPYSISIAKNPFQIVESLRNQNFAILENWREDDFLAQENSDVMAYIDRG SKLLKNQNKVYCLAVKEKYLKMRTTLKDNSISNIFESKEITTRDGRLNQLATINESFRYLEIGVSEGKTFNAINIKSKVA VDPKFQFNTGEYATENINFLEVASDDFFRNYAQEYTPFDLIYLDGLHTFEQSFRDFCASIACSHLKTIWLIDDTFPGSYA QAQSSHQRCISLKKVSGEKNKSWMGDVFKVIAAIHDFFPQYSFAHFPHHGQTVVWSKWRENFRPKWNCLETISRLEYSDF LELQTSLFKREPYENIFERIKKDLN >Mature_985_residues MVIAIEKELEETKVKWQQTQEELDKTKSELHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQQHQSEANGQVKQEL AETKAKLQETEKLLQESQSQKETEEFKAKWQETQQKLDKTKSEFHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQ QHQSEANGQVKQELAETKAKLQETEQLLEESQSQLGEMMGVLEEYKSQMEQTMGALEESQGKLQQKHEELEQVKGELAEK QLGVESELHKELEETKSQWRETEELLEKYQSQLEETMATLEESLSQLDSNQKELEQTKFELHQVQQTAKKTQPSGFLYQK IISIDSSCQEAHQKIQELSKTNKEQIDYSDESRLFKINNAVVKPIEIKSNYEWMGGVCFPENMPGVFRHRRSGKLVGKNE PIYIDRPEIVDNSKEVNVIDNSKNQTYSSNFYQGTYIYAGPLIFHFGHVLTESIHRIWAFNPKLHDGLVFALPVGSNSAS FNPPQWLIQILKIFNISLEKCIFVIYNCTFENLIIPEPGSELSVGVKEWYCSYLERLQQRILEMTNQLRKEKQDLKLFFG RSHILLRGGVAGEKYLENCLLNEGYVSIQPENYNILEQLSYLISAKKIIFVEGSAIYLLEFLSYLEADIVCIPRRGNNVN FYPHIYNKCSNYIIAGGVDNAMRLGAYNTKDAPYSISIAKNPFQIVESLRNQNFAILENWREDDFLAQENSDVMAYIDRG SKLLKNQNKVYCLAVKEKYLKMRTTLKDNSISNIFESKEITTRDGRLNQLATINESFRYLEIGVSEGKTFNAINIKSKVA VDPKFQFNTGEYATENINFLEVASDDFFRNYAQEYTPFDLIYLDGLHTFEQSFRDFCASIACSHLKTIWLIDDTFPGSYA QAQSSHQRCISLKKVSGEKNKSWMGDVFKVIAAIHDFFPQYSFAHFPHHGQTVVWSKWRENFRPKWNCLETISRLEYSDF LELQTSLFKREPYENIFERIKKDLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 114665; Mature: 114665
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIAIEKELEETKVKWQQTQEELDKTKSELHDVREELERSQSQLDEVLGELEQTHFELHQ CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKEKGQQHQSEANGQVKQELAETKAKLQETEKLLQESQSQKETEEFKAKWQETQQKLDKT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSEFHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQQHQSEANGQVKQELAETKAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LQETEQLLEESQSQLGEMMGVLEEYKSQMEQTMGALEESQGKLQQKHEELEQVKGELAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLGVESELHKELEETKSQWRETEELLEKYQSQLEETMATLEESLSQLDSNQKELEQTKFE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LHQVQQTAKKTQPSGFLYQKIISIDSSCQEAHQKIQELSKTNKEQIDYSDESRLFKINNA HHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCC VVKPIEIKSNYEWMGGVCFPENMPGVFRHRRSGKLVGKNEPIYIDRPEIVDNSKEVNVID EECEEEECCCCCCCCCEECCCCCCHHHHHCCCCCCCCCCCCEEECCCHHHCCCCCEEEEE NSKNQTYSSNFYQGTYIYAGPLIFHFGHVLTESIHRIWAFNPKLHDGLVFALPVGSNSAS CCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC FNPPQWLIQILKIFNISLEKCIFVIYNCTFENLIIPEPGSELSVGVKEWYCSYLERLQQR CCCHHHHHHHHHHHCCCHHHHHHHHEECCCCCEECCCCCCCHHCCHHHHHHHHHHHHHHH ILEMTNQLRKEKQDLKLFFGRSHILLRGGVAGEKYLENCLLNEGYVSIQPENYNILEQLS HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHH YLISAKKIIFVEGSAIYLLEFLSYLEADIVCIPRRGNNVNFYPHIYNKCSNYIIAGGVDN HHHCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCEEEECCCCC AMRLGAYNTKDAPYSISIAKNPFQIVESLRNQNFAILENWREDDFLAQENSDVMAYIDRG HHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCCEEEEECCC SKLLKNQNKVYCLAVKEKYLKMRTTLKDNSISNIFESKEITTRDGRLNQLATINESFRYL HHHHCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEE EIGVSEGKTFNAINIKSKVAVDPKFQFNTGEYATENINFLEVASDDFFRNYAQEYTPFDL EEECCCCCEEEEEECCCEEEECCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHCCCEEE IYLDGLHTFEQSFRDFCASIACSHLKTIWLIDDTFPGSYAQAQSSHQRCISLKKVSGEKN EEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC KSWMGDVFKVIAAIHDFFPQYSFAHFPHHGQTVVWSKWRENFRPKWNCLETISRLEYSDF CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHCCHHHH LELQTSLFKREPYENIFERIKKDLN HHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MVIAIEKELEETKVKWQQTQEELDKTKSELHDVREELERSQSQLDEVLGELEQTHFELHQ CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKEKGQQHQSEANGQVKQELAETKAKLQETEKLLQESQSQKETEEFKAKWQETQQKLDKT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSEFHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQQHQSEANGQVKQELAETKAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LQETEQLLEESQSQLGEMMGVLEEYKSQMEQTMGALEESQGKLQQKHEELEQVKGELAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLGVESELHKELEETKSQWRETEELLEKYQSQLEETMATLEESLSQLDSNQKELEQTKFE HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LHQVQQTAKKTQPSGFLYQKIISIDSSCQEAHQKIQELSKTNKEQIDYSDESRLFKINNA HHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCC VVKPIEIKSNYEWMGGVCFPENMPGVFRHRRSGKLVGKNEPIYIDRPEIVDNSKEVNVID EECEEEECCCCCCCCCEECCCCCCHHHHHCCCCCCCCCCCCEEECCCHHHCCCCCEEEEE NSKNQTYSSNFYQGTYIYAGPLIFHFGHVLTESIHRIWAFNPKLHDGLVFALPVGSNSAS CCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC FNPPQWLIQILKIFNISLEKCIFVIYNCTFENLIIPEPGSELSVGVKEWYCSYLERLQQR CCCHHHHHHHHHHHCCCHHHHHHHHEECCCCCEECCCCCCCHHCCHHHHHHHHHHHHHHH ILEMTNQLRKEKQDLKLFFGRSHILLRGGVAGEKYLENCLLNEGYVSIQPENYNILEQLS HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHH YLISAKKIIFVEGSAIYLLEFLSYLEADIVCIPRRGNNVNFYPHIYNKCSNYIIAGGVDN HHHCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCEEEECCCCC AMRLGAYNTKDAPYSISIAKNPFQIVESLRNQNFAILENWREDDFLAQENSDVMAYIDRG HHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCCEEEEECCC SKLLKNQNKVYCLAVKEKYLKMRTTLKDNSISNIFESKEITTRDGRLNQLATINESFRYL HHHHCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEE EIGVSEGKTFNAINIKSKVAVDPKFQFNTGEYATENINFLEVASDDFFRNYAQEYTPFDL EEECCCCCEEEEEECCCEEEECCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHCCCEEE IYLDGLHTFEQSFRDFCASIACSHLKTIWLIDDTFPGSYAQAQSSHQRCISLKKVSGEKN EEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC KSWMGDVFKVIAAIHDFFPQYSFAHFPHHGQTVVWSKWRENFRPKWNCLETISRLEYSDF CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHCCHHHH LELQTSLFKREPYENIFERIKKDLN HHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA