Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475185

Identifier: 113475185

GI number: 113475185

Start: 2255847

End: 2257025

Strand: Reverse

Name: 113475185

Synonym: Tery_1485

Alternate gene names: NA

Gene position: 2257025-2255847 (Counterclockwise)

Preceding gene: 113475186

Following gene: 113475183

Centisome position: 29.12

GC content: 33.67

Gene sequence:

>1179_bases
ATGCTACCAGATCAAAACTCTCAGTCAGTGCAAATGTTTGTTCAAACCTACGATCGGAATTTAGGTGAAATTTATGATGA
GTTATTTTGGGGATATGAAATTAAATATATCAAGGAACAAATTGATAACGAAGATATTATTAATATTTCTGGATGGGTAT
TGGGAAAAAAGTGTCCTATTGTTGCTGTGGAAGTAGCATCTTTGAGGCATGTTGTCAAAAAAGTATCTGTTAATGAGTCA
TATCCTGATATAGTTAAGTTTTATACAGAAACATCTCAAGGAGCAGAAATAGGTTTTAATATAGATTTTATAGCTGATAA
ATTACCACCGAAATTTAACTGGCTAATTCAAGCAGTATTTGCTGATGAAACTCGGATACCAATAGGTTGTATTCAAAGTT
ATCAGGAGAAATCACTAAATGTTCGTAAAACTCCTCTAATAACAAAAAAAGCTATTGAATTTTTAGAAAAATTTTTCCAG
GAAAAACCTCATGCTAAAGTCTTAGAATTTGGTAGTGGCGCTTCGACAATATGGCTATCTAAATTAACTCAAAATCTGAC
TTCTATTGAGCACGATGCTAGGTGGTTTCAGGAGGTAAAAAATCAGATTCAACTGCAGAAAAATTGCCATCCAGTAGATA
TTCAATTATTAGCAAGACCATATCATAAAATATGCGAAAAGTTTGCTGAAGAATCTTTCGATTTAATTATTGTAGATGGT
CGCGATCGAATGAAATGTTTTGAAGCATCAATTAAACTTTTAAAGCCAGGTGGAATATTGATGTTGGATGATGCGCAAAG
GGGGAAGTATAAACAAGCTCAAGATTTATTACAAGATTGGCAATTGACAAAAACTGTTAGCAACCCTCGCCATACTTATT
GGTGGGAAAAGCCATTTGAACAAAGGACAGTTATAGGAAAAAGCCAATCAATTTCTAATCAAAGGCCAATATCTCAGAAG
ATTAAAGAAAATGTAGTTATAGCTGGTGTGTCAATCGTGAAAGATGAAGAGGATATTATCTATTACAATCTAGCTGGAAA
TTATAGAGAAGGCATCAAACATTTCGTAATGTTGGATCATATGTCCTCAGATGGAACTAGGGATGAAATTAGACGCTTTG
CTGATGACTATCCAGAAGCAATGGTTTATACCAATTTCCTAAAGTCCGACTACACATAA

Upstream 100 bases:

>100_bases
AAAGTCTTCAATAGAAAGAGTGGGGAATAGGAAAAAATTAAAAACATTTTGCGCTCTTTTTATTTTCTCAAGTAAATTTA
ACGAAAAATAAATTTTAATT

Downstream 100 bases:

>100_bases
TGCTTCAAGAATAAAATCATATCCTGTACAAGAAGCAATATCTTTTTGACTAAATCCAGTTAATATATTTCTCAGGATTC
TGCGTAAGAAATCTAAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MLPDQNSQSVQMFVQTYDRNLGEIYDELFWGYEIKYIKEQIDNEDIINISGWVLGKKCPIVAVEVASLRHVVKKVSVNES
YPDIVKFYTETSQGAEIGFNIDFIADKLPPKFNWLIQAVFADETRIPIGCIQSYQEKSLNVRKTPLITKKAIEFLEKFFQ
EKPHAKVLEFGSGASTIWLSKLTQNLTSIEHDARWFQEVKNQIQLQKNCHPVDIQLLARPYHKICEKFAEESFDLIIVDG
RDRMKCFEASIKLLKPGGILMLDDAQRGKYKQAQDLLQDWQLTKTVSNPRHTYWWEKPFEQRTVIGKSQSISNQRPISQK
IKENVVIAGVSIVKDEEDIIYYNLAGNYREGIKHFVMLDHMSSDGTRDEIRRFADDYPEAMVYTNFLKSDYT

Sequences:

>Translated_392_residues
MLPDQNSQSVQMFVQTYDRNLGEIYDELFWGYEIKYIKEQIDNEDIINISGWVLGKKCPIVAVEVASLRHVVKKVSVNES
YPDIVKFYTETSQGAEIGFNIDFIADKLPPKFNWLIQAVFADETRIPIGCIQSYQEKSLNVRKTPLITKKAIEFLEKFFQ
EKPHAKVLEFGSGASTIWLSKLTQNLTSIEHDARWFQEVKNQIQLQKNCHPVDIQLLARPYHKICEKFAEESFDLIIVDG
RDRMKCFEASIKLLKPGGILMLDDAQRGKYKQAQDLLQDWQLTKTVSNPRHTYWWEKPFEQRTVIGKSQSISNQRPISQK
IKENVVIAGVSIVKDEEDIIYYNLAGNYREGIKHFVMLDHMSSDGTRDEIRRFADDYPEAMVYTNFLKSDYT
>Mature_392_residues
MLPDQNSQSVQMFVQTYDRNLGEIYDELFWGYEIKYIKEQIDNEDIINISGWVLGKKCPIVAVEVASLRHVVKKVSVNES
YPDIVKFYTETSQGAEIGFNIDFIADKLPPKFNWLIQAVFADETRIPIGCIQSYQEKSLNVRKTPLITKKAIEFLEKFFQ
EKPHAKVLEFGSGASTIWLSKLTQNLTSIEHDARWFQEVKNQIQLQKNCHPVDIQLLARPYHKICEKFAEESFDLIIVDG
RDRMKCFEASIKLLKPGGILMLDDAQRGKYKQAQDLLQDWQLTKTVSNPRHTYWWEKPFEQRTVIGKSQSISNQRPISQK
IKENVVIAGVSIVKDEEDIIYYNLAGNYREGIKHFVMLDHMSSDGTRDEIRRFADDYPEAMVYTNFLKSDYT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45559; Mature: 45559

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDQNSQSVQMFVQTYDRNLGEIYDELFWGYEIKYIKEQIDNEDIINISGWVLGKKCPI
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCEEECCCCCE
VAVEVASLRHVVKKVSVNESYPDIVKFYTETSQGAEIGFNIDFIADKLPPKFNWLIQAVF
EEEHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEECCEEEEHHHCCCCCHHHHHHHHH
ADETRIPIGCIQSYQEKSLNVRKTPLITKKAIEFLEKFFQEKPHAKVLEFGSGASTIWLS
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHH
KLTQNLTSIEHDARWFQEVKNQIQLQKNCHPVDIQLLARPYHKICEKFAEESFDLIIVDG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECC
RDRMKCFEASIKLLKPGGILMLDDAQRGKYKQAQDLLQDWQLTKTVSNPRHTYWWEKPFE
CHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
QRTVIGKSQSISNQRPISQKIKENVVIAGVSIVKDEEDIIYYNLAGNYREGIKHFVMLDH
HHHHCCCCCCCCCCCCHHHHHHCCEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHEEC
MSSDGTRDEIRRFADDYPEAMVYTNFLKSDYT
CCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLPDQNSQSVQMFVQTYDRNLGEIYDELFWGYEIKYIKEQIDNEDIINISGWVLGKKCPI
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCEEECCCCCE
VAVEVASLRHVVKKVSVNESYPDIVKFYTETSQGAEIGFNIDFIADKLPPKFNWLIQAVF
EEEHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEECCEEEEHHHCCCCCHHHHHHHHH
ADETRIPIGCIQSYQEKSLNVRKTPLITKKAIEFLEKFFQEKPHAKVLEFGSGASTIWLS
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHH
KLTQNLTSIEHDARWFQEVKNQIQLQKNCHPVDIQLLARPYHKICEKFAEESFDLIIVDG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECC
RDRMKCFEASIKLLKPGGILMLDDAQRGKYKQAQDLLQDWQLTKTVSNPRHTYWWEKPFE
CHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
QRTVIGKSQSISNQRPISQKIKENVVIAGVSIVKDEEDIIYYNLAGNYREGIKHFVMLDH
HHHHCCCCCCCCCCCCHHHHHHCCEEEEEEEEEECCCCEEEEECCCCHHHHHHHHHHEEC
MSSDGTRDEIRRFADDYPEAMVYTNFLKSDYT
CCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA