Click here to switch to the map view.

The map label for this gene is psbZ [H]

Identifier: 113475142

GI number: 113475142

Start: 2169563

End: 2169763

Strand: Direct

Name: psbZ [H]

Synonym: Tery_1434

Alternate gene names: 113475142

Gene position: 2169563-2169763 (Clockwise)

Preceding gene: 113475141

Following gene: 113475143

Centisome position: 27.99

GC content: 33.33

Gene sequence:

>201_bases
ATGCTAACGTTTCTAACATTACTATTTCAATTTTTACTACTTCTATTAGTAGTCTTATCCTTTATCTTAGTAGTTGGGGT
ACCTGTTGCCTATGCTTCTCCTCAAATCTGGTCTAAAGGTAAACCTTTAATTTTTATTGGTTCTGGTTTGTGGTTATTAC
TGGTAATCTCAGTAGGTGTTCTGAACTTTTTAGTCGTTTAG

Upstream 100 bases:

>100_bases
TACTGAAAATTTATTAACTCAAATTAAAATTACAATCGCCCAGTATATGATAATCTAATTTTTTATACGATAAATTTGCT
GTTGTACAGAGGGAAAAAAA

Downstream 100 bases:

>100_bases
TCCAGGTTTAGCTAGAGCATCAAGAAATCTCTAAGCCATAATCTGAATTTTGCCTGAAATGAATCGGCTGTAAATTAATG
GCCATTAAACCCCATGAATT

Product: photosystem II reaction center protein Z

Products: NA

Alternate protein names: PSII-Z [H]

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MLTFLTLLFQFLLLLLVVLSFILVVGVPVAYASPQIWSKGKPLIFIGSGLWLLLVISVGVLNFLVV

Sequences:

>Translated_66_residues
MLTFLTLLFQFLLLLLVVLSFILVVGVPVAYASPQIWSKGKPLIFIGSGLWLLLVISVGVLNFLVV
>Mature_66_residues
MLTFLTLLFQFLLLLLVVLSFILVVGVPVAYASPQIWSKGKPLIFIGSGLWLLLVISVGVLNFLVV

Specific function: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna. May also aid in binding of psbK, ycf12 and the oxygen-evolving complex to PSII, at least in vitro [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein. Note=Associated with the photosystem II complex [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbZ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002644
- ProDom:   PD004770 [H]

Pfam domain/function: PF01737 Ycf9 [H]

EC number: NA

Molecular weight: Translated: 7244; Mature: 7244

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS00345 ETS_DOMAIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFLTLLFQFLLLLLVVLSFILVVGVPVAYASPQIWSKGKPLIFIGSGLWLLLVISVGV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHH
LNFLVV
HHHHCC
>Mature Secondary Structure
MLTFLTLLFQFLLLLLVVLSFILVVGVPVAYASPQIWSKGKPLIFIGSGLWLLLVISVGV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHH
LNFLVV
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]