| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475141
Identifier: 113475141
GI number: 113475141
Start: 2167779
End: 2168330
Strand: Direct
Name: 113475141
Synonym: Tery_1433
Alternate gene names: NA
Gene position: 2167779-2168330 (Clockwise)
Preceding gene: 113475130
Following gene: 113475142
Centisome position: 27.97
GC content: 31.88
Gene sequence:
>552_bases ATGAACGACAAAAAAACCATACTTCAAGCTTTTCTACTCGAATATGAAAAATTGAAAGAAGAGCAACTAAAACGTATTGA ATTCCGAGACCAAATGATTTATATAACCCTAGGAATATTTGGTAGCATTCTCTCCTTTGCTCTATCAAACAAAACTAATT TGTATGCCCTCTTAGTTATTCCTTGGGTTTGCCTAATTCTCGGTTGGACTTATATAGTTAATGACGAAAAAATTTCAGCT ATCGGAAAATATATTCGACTGACTCTCACTGAAAAAGTCAAAACACAAACAGATTATTCAGATATAGAATCTATATTTAG TTGGGAAATTGCTCATAGAAGTGATAAAAGAAGAAAAAGGCGCAAAATAGAGCAGTTAATTATTGATGAAATTACCTTTG TTTTCTCTGGTTTAGTAGCTTTATTTACTTTCTGGTCTCTAGAGACAAATCTTCCCTTAGTAATTCATATATTTTGTACC TTTGAACTTCTTCTATTAGCAGTTCTAGCCATAGAAATTATCATTTATGCCGATCTAGCTAAAGGTCGATAA
Upstream 100 bases:
>100_bases TTACTATTAGAGTGAATATTATATTCAGGCGATCGCATAAAATAATATTGCCTAATTGATAATTATATTAACCCAGTAAT TTTAGCCGTCAAAAAAATCC
Downstream 100 bases:
>100_bases ATTGCAATTTTTATTCTTAATAATTAAGATAAACTTAGACGATTATGAGAATATTTGACTATTAGTTAAAATCAGGATTA GAATCAAAAAAAATCTAATT
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNDKKTILQAFLLEYEKLKEEQLKRIEFRDQMIYITLGIFGSILSFALSNKTNLYALLVIPWVCLILGWTYIVNDEKISA IGKYIRLTLTEKVKTQTDYSDIESIFSWEIAHRSDKRRKRRKIEQLIIDEITFVFSGLVALFTFWSLETNLPLVIHIFCT FELLLLAVLAIEIIIYADLAKGR
Sequences:
>Translated_183_residues MNDKKTILQAFLLEYEKLKEEQLKRIEFRDQMIYITLGIFGSILSFALSNKTNLYALLVIPWVCLILGWTYIVNDEKISA IGKYIRLTLTEKVKTQTDYSDIESIFSWEIAHRSDKRRKRRKIEQLIIDEITFVFSGLVALFTFWSLETNLPLVIHIFCT FELLLLAVLAIEIIIYADLAKGR >Mature_183_residues MNDKKTILQAFLLEYEKLKEEQLKRIEFRDQMIYITLGIFGSILSFALSNKTNLYALLVIPWVCLILGWTYIVNDEKISA IGKYIRLTLTEKVKTQTDYSDIESIFSWEIAHRSDKRRKRRKIEQLIIDEITFVFSGLVALFTFWSLETNLPLVIHIFCT FELLLLAVLAIEIIIYADLAKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21416; Mature: 21416
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKKTILQAFLLEYEKLKEEQLKRIEFRDQMIYITLGIFGSILSFALSNKTNLYALLVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH PWVCLILGWTYIVNDEKISAIGKYIRLTLTEKVKTQTDYSDIESIFSWEIAHRSDKRRKR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RKIEQLIIDEITFVFSGLVALFTFWSLETNLPLVIHIFCTFELLLLAVLAIEIIIYADLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGR CCC >Mature Secondary Structure MNDKKTILQAFLLEYEKLKEEQLKRIEFRDQMIYITLGIFGSILSFALSNKTNLYALLVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH PWVCLILGWTYIVNDEKISAIGKYIRLTLTEKVKTQTDYSDIESIFSWEIAHRSDKRRKR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RKIEQLIIDEITFVFSGLVALFTFWSLETNLPLVIHIFCTFELLLLAVLAIEIIIYADLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA