| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475106
Identifier: 113475106
GI number: 113475106
Start: 2123603
End: 2123848
Strand: Reverse
Name: 113475106
Synonym: Tery_1390
Alternate gene names: NA
Gene position: 2123848-2123603 (Counterclockwise)
Preceding gene: 113475107
Following gene: 113475102
Centisome position: 27.4
GC content: 28.46
Gene sequence:
>246_bases TTGAGTTGGCCATTGTTTTGGTTTCCTATTATCAAAATTATTAATCAAGAATTTTCTGATAGTAGTCAATTAATTTTTAC CATAGATAGGACACAATGGAAAAATCATAATATTTTCGTTATTGCTGTCATATACAAGAAACGAGCATTAGCTATTTATT GGCAAGTTTTTCACAAAAAAGGCTCTACTAATTTAGCCGAGCAAAAGGCACTTATTAAACCAGTTTTACGGTTATTAAAA ATATAA
Upstream 100 bases:
>100_bases AAAACTGTCAAAATAGAAAGGCTTGCAGGCTGTTTTCCTTTACCAATTAAATATGAAAGCCGTCGCCGTCACATTCAAAG ATTTTTAACATCCTGCATCT
Downstream 100 bases:
>100_bases ATTAGTAGTTATTGGAGACCGGAAATTTCACGGTTTAGAGTTATCTCACTGGCTAAAAGTTCAAGCTAGAAATCAAAAAA TTAATTTTATCTTCAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKKGSTNLAEQKALIKPVLRLLK I
Sequences:
>Translated_81_residues MSWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKKGSTNLAEQKALIKPVLRLLK I >Mature_80_residues SWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKKGSTNLAEQKALIKPVLRLLKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9688; Mature: 9556
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKK CCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHCC GSTNLAEQKALIKPVLRLLKI CCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWPLFWFPIIKIINQEFSDSSQLIFTIDRTQWKNHNIFVIAVIYKKRALAIYWQVFHKK CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHCC GSTNLAEQKALIKPVLRLLKI CCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA