Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475088

Identifier: 113475088

GI number: 113475088

Start: 2092708

End: 2093247

Strand: Reverse

Name: 113475088

Synonym: Tery_1364

Alternate gene names: NA

Gene position: 2093247-2092708 (Counterclockwise)

Preceding gene: 113475091

Following gene: 113475087

Centisome position: 27.01

GC content: 36.48

Gene sequence:

>540_bases
ATGAAATCATTATTATCAGTATCAGAAAATATAACATTTGAAGAGGCGATCGCCCTAACTCAAGAAATTATGTCCGAGAT
AGAAACAGGTCAGCTATCAGAAACTAAAATAGAATCATTAATTGGAGATTTAGTCAAGAGCAAAAATGGTGCTAGAGGAT
TTTTCGTCAGTTATCTTACAGATTCTCGAGCTTTAGCGGATAATCCATCACCCTCAGTATTCAAAGCTTTAGAATCAGCT
CCAGAGATAGTAGTAGAACTGTTGATTAAAAATTTGGCCATGTGTTCGGCAATGGTAGTCCACCATCAGCGAAATCAAGA
TGAAAAGGCAGCCAATGAATCCAAAAAAGTGCGATCGCGAACCACAAAACTAATAAAAAGCATTAAAATACCCAGTTTAT
CAGGTAATATTCAGGAATTATATCAAGGTATAACTACTTGCGAGGGAAACTACAAAGGCTTTTTAAAACGCTGGGGCTAT
GATACTGAGCAATTAAAAGCAATTAAGGAAGTGATAGAACCCTTACTTAGGGCTTGCTAA

Upstream 100 bases:

>100_bases
GAGATTGTTTTTTAGAAGAAATTATGGCCATAACTGGAAAATTATATCTAACATCCTTATTATCATACAAAGTAGTGTAT
TTAATAACTGTCCCATATTT

Downstream 100 bases:

>100_bases
AAAAAAGGACTTTATCAACTAAGTCCAGTAGGGAACGTAAATTAAATAAAACCGGAAATCTGTAGTTTGTGCCTGAGAAA
GCTCTTGAGCGTAATTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKSLLSVSENITFEEAIALTQEIMSEIETGQLSETKIESLIGDLVKSKNGARGFFVSYLTDSRALADNPSPSVFKALESA
PEIVVELLIKNLAMCSAMVVHHQRNQDEKAANESKKVRSRTTKLIKSIKIPSLSGNIQELYQGITTCEGNYKGFLKRWGY
DTEQLKAIKEVIEPLLRAC

Sequences:

>Translated_179_residues
MKSLLSVSENITFEEAIALTQEIMSEIETGQLSETKIESLIGDLVKSKNGARGFFVSYLTDSRALADNPSPSVFKALESA
PEIVVELLIKNLAMCSAMVVHHQRNQDEKAANESKKVRSRTTKLIKSIKIPSLSGNIQELYQGITTCEGNYKGFLKRWGY
DTEQLKAIKEVIEPLLRAC
>Mature_179_residues
MKSLLSVSENITFEEAIALTQEIMSEIETGQLSETKIESLIGDLVKSKNGARGFFVSYLTDSRALADNPSPSVFKALESA
PEIVVELLIKNLAMCSAMVVHHQRNQDEKAANESKKVRSRTTKLIKSIKIPSLSGNIQELYQGITTCEGNYKGFLKRWGY
DTEQLKAIKEVIEPLLRAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19895; Mature: 19895

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLSVSENITFEEAIALTQEIMSEIETGQLSETKIESLIGDLVKSKNGARGFFVSYLT
CCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DSRALADNPSPSVFKALESAPEIVVELLIKNLAMCSAMVVHHQRNQDEKAANESKKVRSR
CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TTKLIKSIKIPSLSGNIQELYQGITTCEGNYKGFLKRWGYDTEQLKAIKEVIEPLLRAC
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKSLLSVSENITFEEAIALTQEIMSEIETGQLSETKIESLIGDLVKSKNGARGFFVSYLT
CCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DSRALADNPSPSVFKALESAPEIVVELLIKNLAMCSAMVVHHQRNQDEKAANESKKVRSR
CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TTKLIKSIKIPSLSGNIQELYQGITTCEGNYKGFLKRWGYDTEQLKAIKEVIEPLLRAC
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA