Click here to switch to the map view.

The map label for this gene is grsT [H]

Identifier: 113475070

GI number: 113475070

Start: 2048695

End: 2049441

Strand: Reverse

Name: grsT [H]

Synonym: Tery_1343

Alternate gene names: 113475070

Gene position: 2049441-2048695 (Counterclockwise)

Preceding gene: 113475071

Following gene: 113475069

Centisome position: 26.44

GC content: 37.88

Gene sequence:

>747_bases
ATGAATACTATTGCTACTCCGTCTCCTTGGATAAAAATCTTTCAACCTTGTCCTCAACCTCAACTACGTTTATTCTGTTT
TCACCCTTCTGCTGCTGGTGCTACTCTTTTTCGCCTCTGGGGAAAATACTTGCCTTCAAATATAGAGGTCTGCGCTATAC
AACTACCAGGAAGGGAAACTCGAATCAAAGAAACCCTGATTACCAAATGGGATGACCTCTTATCTCCATTAATTCAAGAA
TTACAACCCCTAATTACAGAATACCCCTTTGTATTTTTCGGGCATAGTCTCGGCGCATTAATAAGTTTTGAAGTAGTTCG
TCAACTACGCAGGCAAAAACTTCCTATTCCTAAATATATGTTTGTTTCTGGTCGTCGCCCTCCTCATATTCCTATTGATA
ACCTACGTCATCAAGCACCTAATCCGATCTTAATTTCCATATTGCGTGAATACGGTGGTACCCCTGAGGCAGTCCTGCAA
AACCAAGACTTAATGGAATTATTTTTACCTATTTTGCGAGCTGACTTTACCCTCAATGAAAAATATATTTATTTTCCTGA
AGCACCCTTTGAGTTTCCTATCGTTGCTTTTAGAGGTACAGATGATATAGAAGTTAGTAAGCAAAAGTTATCTCAATGGG
AACAGCATACTATTAGTAACTTTGCCTTACATGAATTTCCAGGAGGTCATATGTTTTTCCAACAACAACCAAAAGTTTTA
ATTGAGGCAATCTTAAAATTTATATGA

Upstream 100 bases:

>100_bases
ATACTGGTTAAATAGTTTGAGGCAAATGTTAAAGCAGTTAGCTGCTGTAACCAATTAACAATTTGACAGCTAGAATTTTT
GTGATTTAAATTTGGAGCTA

Downstream 100 bases:

>100_bases
GATAATTATGTAAGTATTCAGCCCTCAGCTATCAGCTAGAAGGAGAAATTAGCCTCCCAGAAGAATTAAAAGTCTGATAG
GAAAAAAATGATTAGCTTTA

Product: thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNTIATPSPWIKIFQPCPQPQLRLFCFHPSAAGATLFRLWGKYLPSNIEVCAIQLPGRETRIKETLITKWDDLLSPLIQE
LQPLITEYPFVFFGHSLGALISFEVVRQLRRQKLPIPKYMFVSGRRPPHIPIDNLRHQAPNPILISILREYGGTPEAVLQ
NQDLMELFLPILRADFTLNEKYIYFPEAPFEFPIVAFRGTDDIEVSKQKLSQWEQHTISNFALHEFPGGHMFFQQQPKVL
IEAILKFI

Sequences:

>Translated_248_residues
MNTIATPSPWIKIFQPCPQPQLRLFCFHPSAAGATLFRLWGKYLPSNIEVCAIQLPGRETRIKETLITKWDDLLSPLIQE
LQPLITEYPFVFFGHSLGALISFEVVRQLRRQKLPIPKYMFVSGRRPPHIPIDNLRHQAPNPILISILREYGGTPEAVLQ
NQDLMELFLPILRADFTLNEKYIYFPEAPFEFPIVAFRGTDDIEVSKQKLSQWEQHTISNFALHEFPGGHMFFQQQPKVL
IEAILKFI
>Mature_248_residues
MNTIATPSPWIKIFQPCPQPQLRLFCFHPSAAGATLFRLWGKYLPSNIEVCAIQLPGRETRIKETLITKWDDLLSPLIQE
LQPLITEYPFVFFGHSLGALISFEVVRQLRRQKLPIPKYMFVSGRRPPHIPIDNLRHQAPNPILISILREYGGTPEAVLQ
NQDLMELFLPILRADFTLNEKYIYFPEAPFEFPIVAFRGTDDIEVSKQKLSQWEQHTISNFALHEFPGGHMFFQQQPKVL
IEAILKFI

Specific function: Probable thioesterase involved in the biosynthesis of gramicidin S [H]

COG id: COG3208

COG function: function code Q; Predicted thioesterase involved in non-ribosomal peptide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase family [H]

Homologues:

Organism=Homo sapiens, GI89257335, Length=224, Percent_Identity=29.9107142857143, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI8922871, Length=190, Percent_Identity=29.4736842105263, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012223
- InterPro:   IPR001031 [H]

Pfam domain/function: PF00975 Thioesterase [H]

EC number: NA

Molecular weight: Translated: 28708; Mature: 28708

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIATPSPWIKIFQPCPQPQLRLFCFHPSAAGATLFRLWGKYLPSNIEVCAIQLPGRET
CCCCCCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHH
RIKETLITKWDDLLSPLIQELQPLITEYPFVFFGHSLGALISFEVVRQLRRQKLPIPKYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
FVSGRRPPHIPIDNLRHQAPNPILISILREYGGTPEAVLQNQDLMELFLPILRADFTLNE
EECCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCEECC
KYIYFPEAPFEFPIVAFRGTDDIEVSKQKLSQWEQHTISNFALHEFPGGHMFFQQQPKVL
CEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHH
IEAILKFI
HHHHHHHC
>Mature Secondary Structure
MNTIATPSPWIKIFQPCPQPQLRLFCFHPSAAGATLFRLWGKYLPSNIEVCAIQLPGRET
CCCCCCCCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHH
RIKETLITKWDDLLSPLIQELQPLITEYPFVFFGHSLGALISFEVVRQLRRQKLPIPKYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
FVSGRRPPHIPIDNLRHQAPNPILISILREYGGTPEAVLQNQDLMELFLPILRADFTLNE
EECCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCEECC
KYIYFPEAPFEFPIVAFRGTDDIEVSKQKLSQWEQHTISNFALHEFPGGHMFFQQQPKVL
CEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHH
IEAILKFI
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2477357; 7512553 [H]