Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475064

Identifier: 113475064

GI number: 113475064

Start: 2031910

End: 2032515

Strand: Reverse

Name: 113475064

Synonym: Tery_1336

Alternate gene names: NA

Gene position: 2032515-2031910 (Counterclockwise)

Preceding gene: 113475065

Following gene: 113475063

Centisome position: 26.23

GC content: 34.32

Gene sequence:

>606_bases
ATGAATAATCAGCCTTCTCGTTCTGAATTTTCTCCTAATAATGCCTCTAGTGAGATAGAGTTAGATTTATTAAGTGCGAT
AGTTCTTGAAGATCTTGCTTATCCTTGGAATCCCAAAGCACCAGAGTCAGATGCTTATTTTAATTCTCTTGAACAAAAGT
TACCTTTATCTGATTTACTTAATGATGTGGAAATGACTTCTACTTGCCAAAATTTTTATAGTCAAACTGACAAACTTTGG
ATAATTATTGATACTCAGAATGCTTTATATAAAAAGTTTGCAGGTTTTGCTCCTAAGAATTTTCTTAAGAAGTTAGTCAA
GATTGCAATTAATGTTGTCGATCAGGTAAATCGTTTAGGTTCTACTTTATCTCTTTCAGACCAATTGGTACATTGTGTTA
GCGAAGTTTTACCAGGTTGGGATTTGGAAGATTTGGAAGTAATGGCCCGTCCTCTTGCTTATTCTATGCGTGGTGAAAAA
AATGATACAGTGGAAAATATTTTAGCAACAATGGAATCTGTTGAGTGGCATGATTTATCTGAAGTTGAACAAGCAAGGTT
GAGTTTAGCGATCGCGCTTTATGCTATATCTCAAGTCAGTAGTTAA

Upstream 100 bases:

>100_bases
AGCTTATGTCAGTAGGAAGTAAAAATATTGCTAATTATTCTGAATTCAGCTATGCCTACTATAGAATAGAAGATTCTTAT
ATGTACCCAGGAATAAAATT

Downstream 100 bases:

>100_bases
TTTTTCTATTCGTAAGTTCTATATCATCATTGTCTATAGTGGTTTTCAGTTTTTTAACATACCCGCCTTTAATTTCTATC
TCAACTACCTGGTTACTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNNQPSRSEFSPNNASSEIELDLLSAIVLEDLAYPWNPKAPESDAYFNSLEQKLPLSDLLNDVEMTSTCQNFYSQTDKLW
IIIDTQNALYKKFAGFAPKNFLKKLVKIAINVVDQVNRLGSTLSLSDQLVHCVSEVLPGWDLEDLEVMARPLAYSMRGEK
NDTVENILATMESVEWHDLSEVEQARLSLAIALYAISQVSS

Sequences:

>Translated_201_residues
MNNQPSRSEFSPNNASSEIELDLLSAIVLEDLAYPWNPKAPESDAYFNSLEQKLPLSDLLNDVEMTSTCQNFYSQTDKLW
IIIDTQNALYKKFAGFAPKNFLKKLVKIAINVVDQVNRLGSTLSLSDQLVHCVSEVLPGWDLEDLEVMARPLAYSMRGEK
NDTVENILATMESVEWHDLSEVEQARLSLAIALYAISQVSS
>Mature_201_residues
MNNQPSRSEFSPNNASSEIELDLLSAIVLEDLAYPWNPKAPESDAYFNSLEQKLPLSDLLNDVEMTSTCQNFYSQTDKLW
IIIDTQNALYKKFAGFAPKNFLKKLVKIAINVVDQVNRLGSTLSLSDQLVHCVSEVLPGWDLEDLEVMARPLAYSMRGEK
NDTVENILATMESVEWHDLSEVEQARLSLAIALYAISQVSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22575; Mature: 22575

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQPSRSEFSPNNASSEIELDLLSAIVLEDLAYPWNPKAPESDAYFNSLEQKLPLSDLL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHH
NDVEMTSTCQNFYSQTDKLWIIIDTQNALYKKFAGFAPKNFLKKLVKIAINVVDQVNRLG
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
STLSLSDQLVHCVSEVLPGWDLEDLEVMARPLAYSMRGEKNDTVENILATMESVEWHDLS
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH
EVEQARLSLAIALYAISQVSS
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNQPSRSEFSPNNASSEIELDLLSAIVLEDLAYPWNPKAPESDAYFNSLEQKLPLSDLL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHH
NDVEMTSTCQNFYSQTDKLWIIIDTQNALYKKFAGFAPKNFLKKLVKIAINVVDQVNRLG
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
STLSLSDQLVHCVSEVLPGWDLEDLEVMARPLAYSMRGEKNDTVENILATMESVEWHDLS
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHH
EVEQARLSLAIALYAISQVSS
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA