| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475062
Identifier: 113475062
GI number: 113475062
Start: 2030402
End: 2030767
Strand: Direct
Name: 113475062
Synonym: Tery_1333
Alternate gene names: NA
Gene position: 2030402-2030767 (Clockwise)
Preceding gene: 113475060
Following gene: 113475066
Centisome position: 26.2
GC content: 29.51
Gene sequence:
>366_bases TTGTTTCTCTTTTCAAAGGTACAAGCATTGTATTGGCACTTAATAGGAGCAGCAGATACTATTGAATATATATCAATGTT ATTAGGACGTCATCGTACAAATTTATCACAATGGTTTGCTACCCACATAAAATTTAGCATAGAAGACTTATTGAACAATA GAAAAATTGTTAGTAAACCGAAAAAAATATCACCCATATTAGACAATAAACTTAGAGCTGAACTAGAAGAATTAGAGGGT TTTAATAGTTATAATAAAATACAAATATGGTGGAAAGCATTGTGTGATATTAATCTAGTATACTCAACAGTATACAGGTA TGTTTATGAGCACTTAAAGGCAAAAAAAAAGTATATCATCCAGTGA
Upstream 100 bases:
>100_bases ATGAACATGAAAACAGTGAATAATATGGCGTGTCTTGTTAAACTAGATATTCTGGAATCATCCAAAGAACTCCAAGAAAT ATTATCCTGACAGACAACAA
Downstream 100 bases:
>100_bases TTATTAAACGAAATTTAACAGATTTTGAAAAGTAAAAAAAATGCCATAACTGCCAGAAAAAGTTATTAAAAAATTTAAGT TCCAGGAAAAAATTATGGAA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MFLFSKVQALYWHLIGAADTIEYISMLLGRHRTNLSQWFATHIKFSIEDLLNNRKIVSKPKKISPILDNKLRAELEELEG FNSYNKIQIWWKALCDINLVYSTVYRYVYEHLKAKKKYIIQ
Sequences:
>Translated_121_residues MFLFSKVQALYWHLIGAADTIEYISMLLGRHRTNLSQWFATHIKFSIEDLLNNRKIVSKPKKISPILDNKLRAELEELEG FNSYNKIQIWWKALCDINLVYSTVYRYVYEHLKAKKKYIIQ >Mature_121_residues MFLFSKVQALYWHLIGAADTIEYISMLLGRHRTNLSQWFATHIKFSIEDLLNNRKIVSKPKKISPILDNKLRAELEELEG FNSYNKIQIWWKALCDINLVYSTVYRYVYEHLKAKKKYIIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14469; Mature: 14469
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFSKVQALYWHLIGAADTIEYISMLLGRHRTNLSQWFATHIKFSIEDLLNNRKIVSKP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCC KKISPILDNKLRAELEELEGFNSYNKIQIWWKALCDINLVYSTVYRYVYEHLKAKKKYII CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q C >Mature Secondary Structure MFLFSKVQALYWHLIGAADTIEYISMLLGRHRTNLSQWFATHIKFSIEDLLNNRKIVSKP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCC KKISPILDNKLRAELEELEGFNSYNKIQIWWKALCDINLVYSTVYRYVYEHLKAKKKYII CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA