| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is sglT [H]
Identifier: 113475057
GI number: 113475057
Start: 2019402
End: 2021213
Strand: Direct
Name: sglT [H]
Synonym: Tery_1324
Alternate gene names: 113475057
Gene position: 2019402-2021213 (Clockwise)
Preceding gene: 113475056
Following gene: 113475060
Centisome position: 26.06
GC content: 36.48
Gene sequence:
>1812_bases ATGAAACTAATTGATTGGCTAATTGTTTTACTATACCTTATTTTAACTATGTGGATGGGGCTATATCTATCTCGCAAAGG TGCAAAAAGTTTAGCAGACTTTTTTGTTTCTGGGCGATCGCTTCCTTGGTGGTTAGCAGGTACAAGTATGGCAGCTACAA CTTTTTCCATAGATACTCCTCTTTATATTACAGGGGTTGTAGCTAACCGAGGAATAGCTGGTAATTGGGAATGGTGGATT TTTGCTGTTTCTCATGTAATTATGATTTATATTTTTGCTAAAATGTGGCGACGCTCGGAAGTAATTACTGATGCTGAATT AACTGAAATTCGTTACGGCGGAAATATGGCAGCTGTTCTACGAGGAGTAAAAGCTTTTATCTTTGCTATTCCTATGAATT GTATTGCTATTGGTTATGCTATGTTAGCTATGGTTAAAGTTGTTGAAGCATTGCAAATTTGGCAAAGTTTAGGTATTGAT GCTAATGCCAATAATCTCAAATTATTAAGTGTGATAGGTGTAAGTATATTTGTATTAATTTATGCTGGTTTATCTGGTTT ATGGGGAGTAGTTGCTACAGATTTTTTCCAATTTTTTCTAGCACTATTTGGGGCAATTATTGTAGCGTTTTTTGCTGTTA ATAGTGTGGGTGGAATACAAGAATTAATTATTAAAATTCCTCAAGTTATCCCAGACAAAGATATTTTATCATTTGCACCT TTTACTATTGGTGGAAATGGTAACTCTTGGATTACTTTTAGCAAAACAGCAGGCATAACTGCGAGTACATTTTTTGCTTA TATTGCTATTCAATGGTGGTCTTGGCGCCGCAGTGATGGAGGAGGAGAATTTGTACAAAGATTTGCTGCTGCAAAAAATG AAACAGAAGCAGAAAAAGCAGCCTGGTTATTTAATATAATGCACTATGTTATTAGAACCTGGCCTTGGATTTTAGTTGCT TTAGCTTCTATTATAATTTACCCCGATTTACAAGATAGAGAATTGGGTTATCCTAAATTAATGATTGATTTTCTTTCTCC AGGAATTTTAGGCTTAGTTGTTGCTTCTTTAGTGGCAGCATTTATGAGTACAGTTTCTACTTCTATTAATTGGGGCGCTT CTTTTATTACTAATGATTTATATCGAAGATTTATTAAACCTGATGCTACTCAGGCAGAATTAGTTTTGGTAGGACGACTT TCTTCTCTATTAGTAACAGTTTTAGGAGGAGTTGCTGCATTTTTTGCTAAAGATGTGGCAACAGTATTTAGGTTAGTAAT AGCTATTGGAACAGGTTCGGGGTTGGTATTAGTTTTACGTTGGTTTTGGTGGCGAGTAAATGCAGCAGCAGAATTAACTG CTATTGTCGCTAGCTTTTTTGTGGGGATGGCAACTAGTTTATTTCCTGCCTTCAAAATAGAAGATTTTGGTTTGCGAATT ATCTTTATTACTGTAACTGTAACAGTTTTGTGGGTGGTAGCAATGTTGATTACACCGCAAGAGTCTGATGCTACTTTAGA AGACTTTTATCGGCGATCGCTCCCCGGTGGTCCTGGTTGGCAACGGCAAAGAGTAAGCACTGGTTTAGCTCCTGCACAAA ATTTGGGTAAGGATTTACAAAAGGTTCTGGCATCTATATTATTATTGTTTGGAGCGTTGTTGGCGACTGGTGGTTTCCTG TTACTTAAGCCAACTATTGGTTGGATATTTATGATTATTGCTGTTTTCAGCGGGATGTGGTTGCGACAACTCAATAAGTC TAAAATTTTACCTATGCCAAGACCAGGGTTAGATGATGAAGATTTGTTATAA
Upstream 100 bases:
>100_bases CTAAATTACTTACATATCCTAGTAAGTGGTAAATTATAGAGTATTAAAAAATGAATAAATATGGTAAATTCTAAAGGGAT TACTTGTTAACTAAAAATTT
Downstream 100 bases:
>100_bases ATGACTTCTGAGAATTTATCCATTTTAAAAATGTTTAAAGTAGTTTCGCTTCTTGTGATGTGAAATAATTACCTAGAGGA GTTCTATGAAAAGTGTTTTC
Product: Na+/solute symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 603; Mature: 603
Protein sequence:
>603_residues MKLIDWLIVLLYLILTMWMGLYLSRKGAKSLADFFVSGRSLPWWLAGTSMAATTFSIDTPLYITGVVANRGIAGNWEWWI FAVSHVIMIYIFAKMWRRSEVITDAELTEIRYGGNMAAVLRGVKAFIFAIPMNCIAIGYAMLAMVKVVEALQIWQSLGID ANANNLKLLSVIGVSIFVLIYAGLSGLWGVVATDFFQFFLALFGAIIVAFFAVNSVGGIQELIIKIPQVIPDKDILSFAP FTIGGNGNSWITFSKTAGITASTFFAYIAIQWWSWRRSDGGGEFVQRFAAAKNETEAEKAAWLFNIMHYVIRTWPWILVA LASIIIYPDLQDRELGYPKLMIDFLSPGILGLVVASLVAAFMSTVSTSINWGASFITNDLYRRFIKPDATQAELVLVGRL SSLLVTVLGGVAAFFAKDVATVFRLVIAIGTGSGLVLVLRWFWWRVNAAAELTAIVASFFVGMATSLFPAFKIEDFGLRI IFITVTVTVLWVVAMLITPQESDATLEDFYRRSLPGGPGWQRQRVSTGLAPAQNLGKDLQKVLASILLLFGALLATGGFL LLKPTIGWIFMIIAVFSGMWLRQLNKSKILPMPRPGLDDEDLL
Sequences:
>Translated_603_residues MKLIDWLIVLLYLILTMWMGLYLSRKGAKSLADFFVSGRSLPWWLAGTSMAATTFSIDTPLYITGVVANRGIAGNWEWWI FAVSHVIMIYIFAKMWRRSEVITDAELTEIRYGGNMAAVLRGVKAFIFAIPMNCIAIGYAMLAMVKVVEALQIWQSLGID ANANNLKLLSVIGVSIFVLIYAGLSGLWGVVATDFFQFFLALFGAIIVAFFAVNSVGGIQELIIKIPQVIPDKDILSFAP FTIGGNGNSWITFSKTAGITASTFFAYIAIQWWSWRRSDGGGEFVQRFAAAKNETEAEKAAWLFNIMHYVIRTWPWILVA LASIIIYPDLQDRELGYPKLMIDFLSPGILGLVVASLVAAFMSTVSTSINWGASFITNDLYRRFIKPDATQAELVLVGRL SSLLVTVLGGVAAFFAKDVATVFRLVIAIGTGSGLVLVLRWFWWRVNAAAELTAIVASFFVGMATSLFPAFKIEDFGLRI IFITVTVTVLWVVAMLITPQESDATLEDFYRRSLPGGPGWQRQRVSTGLAPAQNLGKDLQKVLASILLLFGALLATGGFL LLKPTIGWIFMIIAVFSGMWLRQLNKSKILPMPRPGLDDEDLL >Mature_603_residues MKLIDWLIVLLYLILTMWMGLYLSRKGAKSLADFFVSGRSLPWWLAGTSMAATTFSIDTPLYITGVVANRGIAGNWEWWI FAVSHVIMIYIFAKMWRRSEVITDAELTEIRYGGNMAAVLRGVKAFIFAIPMNCIAIGYAMLAMVKVVEALQIWQSLGID ANANNLKLLSVIGVSIFVLIYAGLSGLWGVVATDFFQFFLALFGAIIVAFFAVNSVGGIQELIIKIPQVIPDKDILSFAP FTIGGNGNSWITFSKTAGITASTFFAYIAIQWWSWRRSDGGGEFVQRFAAAKNETEAEKAAWLFNIMHYVIRTWPWILVA LASIIIYPDLQDRELGYPKLMIDFLSPGILGLVVASLVAAFMSTVSTSINWGASFITNDLYRRFIKPDATQAELVLVGRL SSLLVTVLGGVAAFFAKDVATVFRLVIAIGTGSGLVLVLRWFWWRVNAAAELTAIVASFFVGMATSLFPAFKIEDFGLRI IFITVTVTVLWVVAMLITPQESDATLEDFYRRSLPGGPGWQRQRVSTGLAPAQNLGKDLQKVLASILLLFGALLATGGFL LLKPTIGWIFMIIAVFSGMWLRQLNKSKILPMPRPGLDDEDLL
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=431, Percent_Identity=23.6658932714617, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI4507033, Length=425, Percent_Identity=24.9411764705882, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI109659836, Length=495, Percent_Identity=22.4242424242424, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI17941285, Length=489, Percent_Identity=22.9038854805726, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI110835708, Length=523, Percent_Identity=24.0917782026769, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI4507031, Length=479, Percent_Identity=23.7995824634656, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI109659839, Length=511, Percent_Identity=21.7221135029354, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI4507035, Length=412, Percent_Identity=25.2427184466019, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI206597483, Length=404, Percent_Identity=21.7821782178218, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1790113, Length=407, Percent_Identity=23.8329238329238, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 66612; Mature: 66612
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIDWLIVLLYLILTMWMGLYLSRKGAKSLADFFVSGRSLPWWLAGTSMAATTFSIDTP CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCC LYITGVVANRGIAGNWEWWIFAVSHVIMIYIFAKMWRRSEVITDAELTEIRYGGNMAAVL EEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCHHHHH RGVKAFIFAIPMNCIAIGYAMLAMVKVVEALQIWQSLGIDANANNLKLLSVIGVSIFVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHH YAGLSGLWGVVATDFFQFFLALFGAIIVAFFAVNSVGGIQELIIKIPQVIPDKDILSFAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCC FTIGGNGNSWITFSKTAGITASTFFAYIAIQWWSWRRSDGGGEFVQRFAAAKNETEAEKA EEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH AWLFNIMHYVIRTWPWILVALASIIIYPDLQDRELGYPKLMIDFLSPGILGLVVASLVAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH FMSTVSTSINWGASFITNDLYRRFIKPDATQAELVLVGRLSSLLVTVLGGVAAFFAKDVA HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFRLVIAIGTGSGLVLVLRWFWWRVNAAAELTAIVASFFVGMATSLFPAFKIEDFGLRI HHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEE IFITVTVTVLWVVAMLITPQESDATLEDFYRRSLPGGPGWQRQRVSTGLAPAQNLGKDLQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHH KVLASILLLFGALLATGGFLLLKPTIGWIFMIIAVFSGMWLRQLNKSKILPMPRPGLDDE HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DLL CCC >Mature Secondary Structure MKLIDWLIVLLYLILTMWMGLYLSRKGAKSLADFFVSGRSLPWWLAGTSMAATTFSIDTP CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCC LYITGVVANRGIAGNWEWWIFAVSHVIMIYIFAKMWRRSEVITDAELTEIRYGGNMAAVL EEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCHHHHH RGVKAFIFAIPMNCIAIGYAMLAMVKVVEALQIWQSLGIDANANNLKLLSVIGVSIFVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHH YAGLSGLWGVVATDFFQFFLALFGAIIVAFFAVNSVGGIQELIIKIPQVIPDKDILSFAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCC FTIGGNGNSWITFSKTAGITASTFFAYIAIQWWSWRRSDGGGEFVQRFAAAKNETEAEKA EEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH AWLFNIMHYVIRTWPWILVALASIIIYPDLQDRELGYPKLMIDFLSPGILGLVVASLVAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH FMSTVSTSINWGASFITNDLYRRFIKPDATQAELVLVGRLSSLLVTVLGGVAAFFAKDVA HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVFRLVIAIGTGSGLVLVLRWFWWRVNAAAELTAIVASFFVGMATSLFPAFKIEDFGLRI HHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEE IFITVTVTVLWVVAMLITPQESDATLEDFYRRSLPGGPGWQRQRVSTGLAPAQNLGKDLQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHH KVLASILLLFGALLATGGFLLLKPTIGWIFMIIAVFSGMWLRQLNKSKILPMPRPGLDDE HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DLL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]