Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474982

Identifier: 113474982

GI number: 113474982

Start: 1889069

End: 1889311

Strand: Direct

Name: 113474982

Synonym: Tery_1215

Alternate gene names: NA

Gene position: 1889069-1889311 (Clockwise)

Preceding gene: 113474980

Following gene: 113474988

Centisome position: 24.37

GC content: 39.51

Gene sequence:

>243_bases
GTGGGAACTACTCGAATCTCTGCTACCGAAACCTCTACTCAACGAGGGCCAAAACCAAATGCTAATCTCATAGAAGTAGT
AAATAGTATATTCTATATCCTTTACTCTGATTGTCATTGGCGTTCTTTGCCCCAGGATCTACCACCTTGGCAAACTGTGT
CAACAAAATTTTCTAAATGCAACGGATATGTTGTTTGGGAACAAATCAATCATACTTTATGGCGAGAGACAAGAGTCCAA
TAA

Upstream 100 bases:

>100_bases
GGCCATGAAAAAGTATTGAAGGTAGGAAAATAAAAAAAACAATGATCACTGTCAAATAAATGTCGCGAAAATCTTTAGCC
AAGGCTCTAAGCCCTCGCCA

Downstream 100 bases:

>100_bases
GCAAGACTTAATGGAGAACCTACTGCAGCCATTGTTGATTCTCGTAGGGTAAAAACAACAGCAAAAAGGGGGAAGTATAT
GGTTATGATGGTGGTAAAAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MGTTRISATETSTQRGPKPNANLIEVVNSIFYILYSDCHWRSLPQDLPPWQTVSTKFSKCNGYVVWEQINHTLWRETRVQ

Sequences:

>Translated_80_residues
MGTTRISATETSTQRGPKPNANLIEVVNSIFYILYSDCHWRSLPQDLPPWQTVSTKFSKCNGYVVWEQINHTLWRETRVQ
>Mature_79_residues
GTTRISATETSTQRGPKPNANLIEVVNSIFYILYSDCHWRSLPQDLPPWQTVSTKFSKCNGYVVWEQINHTLWRETRVQ

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9327; Mature: 9195

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTTRISATETSTQRGPKPNANLIEVVNSIFYILYSDCHWRSLPQDLPPWQTVSTKFSKC
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCC
NGYVVWEQINHTLWRETRVQ
CCEEEHHHHCHHHHHHHCCC
>Mature Secondary Structure 
GTTRISATETSTQRGPKPNANLIEVVNSIFYILYSDCHWRSLPQDLPPWQTVSTKFSKC
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCC
NGYVVWEQINHTLWRETRVQ
CCEEEHHHHCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA