Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is wcaE [C]

Identifier: 113474970

GI number: 113474970

Start: 1875929

End: 1876612

Strand: Direct

Name: wcaE [C]

Synonym: Tery_1201

Alternate gene names: 113474970

Gene position: 1875929-1876612 (Clockwise)

Preceding gene: 113474967

Following gene: 113474972

Centisome position: 24.21

GC content: 34.06

Gene sequence:

>684_bases
ATGAGCAGTATTTCGATTATTATTCCGGTGTTAAATGAAGTTGGGACGATCGCCCAAACTATTTCCACAGCTCAAACAGG
AAAAAATGTAGAAATAATTGTAGTTGACGGTGGCAGTAATGATGGTACTATTGAAGTTGTTAAGTCTTTAAATATTAAAC
TTATTTATTCCCTCCCTGGTCGTAGTATTCAAATGAATTTTGGGGCAAAGTTAGCAACGGGAAATATTCTTTTGTTTCTT
CATGGAGATACTTTTTTACCATTAAATTTTGACGAATTATTAAGAGAAATCATAGTTCAACCGAATATTATTGCAGGTGC
GTTTGAATTAGGTATTAGAGGAAAAAAAAGAATTTTACGAATAGTCGAGAGCATAGTAAATTGGCGATCGCGTTATTTAC
AAATGCCTTATGGAGACCAAGGAATTTTTCTTTCGGCTCAAGTATTTGAACAAATTGGTTGCTTCCCAGAAATACCAATT
ATGGAAGATTTTGAGTTGATCCAAAAGTTAAGAAAAAGAGGACGAATTGGAATTATATCAAAACCAGTATTAACCTCTGA
TCGTCGGTGGCAAAAGTTGGGGATATTGAAAACGACTCTAATTAATCAAGTAATAATTATTGCTTACTTGCTTGGGTTGC
CTCCAAAAACATTAGCACAATGGTATCGTAGTCATCTGAAGTAA

Upstream 100 bases:

>100_bases
ATATATTTAAAGGTAACATAGCTATATAACTAATCGCTAAGTGCTGTTAGCGCAGTATTTTAGACAAAATGGTTATATAA
ATTCCCTTACTAAAAAATTG

Downstream 100 bases:

>100_bases
GACTACCTGATTAAATATCAAAGTATTGACTGATATTGGCTAAAGTTTTTTTCTGTCTAAAAAAAAGTACCTGTATCAGA
TCTAAAACCCTCACATTTTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferases Involved In Cell Wall Biogenesis

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSSISIIIPVLNEVGTIAQTISTAQTGKNVEIIVVDGGSNDGTIEVVKSLNIKLIYSLPGRSIQMNFGAKLATGNILLFL
HGDTFLPLNFDELLREIIVQPNIIAGAFELGIRGKKRILRIVESIVNWRSRYLQMPYGDQGIFLSAQVFEQIGCFPEIPI
MEDFELIQKLRKRGRIGIISKPVLTSDRRWQKLGILKTTLINQVIIIAYLLGLPPKTLAQWYRSHLK

Sequences:

>Translated_227_residues
MSSISIIIPVLNEVGTIAQTISTAQTGKNVEIIVVDGGSNDGTIEVVKSLNIKLIYSLPGRSIQMNFGAKLATGNILLFL
HGDTFLPLNFDELLREIIVQPNIIAGAFELGIRGKKRILRIVESIVNWRSRYLQMPYGDQGIFLSAQVFEQIGCFPEIPI
MEDFELIQKLRKRGRIGIISKPVLTSDRRWQKLGILKTTLINQVIIIAYLLGLPPKTLAQWYRSHLK
>Mature_226_residues
SSISIIIPVLNEVGTIAQTISTAQTGKNVEIIVVDGGSNDGTIEVVKSLNIKLIYSLPGRSIQMNFGAKLATGNILLFLH
GDTFLPLNFDELLREIIVQPNIIAGAFELGIRGKKRILRIVESIVNWRSRYLQMPYGDQGIFLSAQVFEQIGCFPEIPIM
EDFELIQKLRKRGRIGIISKPVLTSDRRWQKLGILKTTLINQVIIIAYLLGLPPKTLAQWYRSHLK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25439; Mature: 25307

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSISIIIPVLNEVGTIAQTISTAQTGKNVEIIVVDGGSNDGTIEVVKSLNIKLIYSLPG
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEEECCC
RSIQMNFGAKLATGNILLFLHGDTFLPLNFDELLREIIVQPNIIAGAFELGIRGKKRILR
CEEEEECCCEEECCCEEEEEECCEEECCCHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHH
IVESIVNWRSRYLQMPYGDQGIFLSAQVFEQIGCFPEIPIMEDFELIQKLRKRGRIGIIS
HHHHHHHHHHHEEECCCCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEE
KPVLTSDRRWQKLGILKTTLINQVIIIAYLLGLPPKTLAQWYRSHLK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SSISIIIPVLNEVGTIAQTISTAQTGKNVEIIVVDGGSNDGTIEVVKSLNIKLIYSLPG
CCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEEECCC
RSIQMNFGAKLATGNILLFLHGDTFLPLNFDELLREIIVQPNIIAGAFELGIRGKKRILR
CEEEEECCCEEECCCEEEEEECCEEECCCHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHH
IVESIVNWRSRYLQMPYGDQGIFLSAQVFEQIGCFPEIPIMEDFELIQKLRKRGRIGIIS
HHHHHHHHHHHEEECCCCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEE
KPVLTSDRRWQKLGILKTTLINQVIIIAYLLGLPPKTLAQWYRSHLK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA