| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474966
Identifier: 113474966
GI number: 113474966
Start: 1872823
End: 1873305
Strand: Direct
Name: 113474966
Synonym: Tery_1197
Alternate gene names: NA
Gene position: 1872823-1873305 (Clockwise)
Preceding gene: 113474965
Following gene: 113474967
Centisome position: 24.17
GC content: 26.92
Gene sequence:
>483_bases ATGAATCCAACTTTAGAATATATTTATAACCATCCAAAAGAAACAAAAAGAATTATTGGCATTACTTATGAACAGCTAAT AAAATTAATAGCAAAGGCCCAAATAATAGAATCAGAGAAAAAGAAGGCGATCGCTAAAACAGAAAAAAGATTAATTAAAG CAGGTGGAGTCAGAAAAAAGAATTTAACAAAGGAGGAAGAAATAATTTTAACGTTATTTTATTTACATCAAATACCGACT TTTCAAACATTAGGAATTAACTTTGGTATAAGTGAATCAAGTGCTAATAATATTTTTCATTACTGGATAGATATTCTCAG AGAATTACTGCCAGCAAGTTTATTAGAACAAGTAAAAAAAAAAGAAAATGAATTGGAATGGGTAAAGGAGATATTAACAG AATTAGAATTAATTGTAGATAGTACAGAACAAAGTAGAGAAAGACCAAGTGAATATAAAGACCAAGAAAAATATAAAATA TGA
Upstream 100 bases:
>100_bases TAAGAGAGAAGTTAGGGGAAAATGGAATTAAACAATAGACATCTCCAAAATAAAAAATAAGGTAAAATTATCAAAACCAT TTATTTATAAAGTCTCCCAA
Downstream 100 bases:
>100_bases AAAAATAAAAATCATACTTTTAAAAATCAAATAATAACGACACCAAAAGGAACAGAAATAGTAGATGTAATAGTAGGAGA AAAAGGTCCAGTAAGTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFYLHQIPT FQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKENELEWVKEILTELELIVDSTEQSRERPSEYKDQEKYKI
Sequences:
>Translated_160_residues MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFYLHQIPT FQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKENELEWVKEILTELELIVDSTEQSRERPSEYKDQEKYKI >Mature_160_residues MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFYLHQIPT FQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKENELEWVKEILTELELIVDSTEQSRERPSEYKDQEKYKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18832; Mature: 18832
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKK CCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NLTKEEEIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKK CCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KENELEWVKEILTELELIVDSTEQSRERPSEYKDQEKYKI HHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure MNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKK CCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NLTKEEEIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKK CCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KENELEWVKEILTELELIVDSTEQSRERPSEYKDQEKYKI HHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA