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The map label for this gene is 113474964

Identifier: 113474964

GI number: 113474964

Start: 1869679

End: 1870758

Strand: Direct

Name: 113474964

Synonym: Tery_1195

Alternate gene names: NA

Gene position: 1869679-1870758 (Clockwise)

Preceding gene: 113474949

Following gene: 113474965

Centisome position: 24.12

GC content: 37.13

Gene sequence:

>1080_bases
ATGCTTGACGCACTTATTATTATTTCATTTGTATTTGCTGGAGCGGGAATAGGTTTCTATAGCATAGAACTACTTCCACC
TAACGTATTGCTAGAAGTCACTAACATCGAAGGTTTACGTTCAGTATTATCTGCCTTCACTTCTTTAATTGGGTTTGTAG
TGGGATTAGTATTTCAAACTACATATCGCCGAGTAGAAATTAAATTCAGACAAATGCCTGTAGACTTATTATTAACTCGG
GCGATAGGATTAATAATTGGACTATTAGTGGCCAACTTAATGCTGGCGCCACTGTTTTTACTTCCTATTCCCGATGAGTT
TAGTTTCATTAAACCTCTTGTGGCAGTTTTAGCTAGTGTGATGTTAGGTTTTACTGGAGTTAATGTTGCTGATACTCATG
GTCGTGGTTTTTTACGATTAATTAATCCTAACAGTCTGGATGCAGTATTAGTAGCTGAAGGTACTCTCAAACCTTCTACT
ACTAAGATTTTGGATACTAGCTGTATTATTGATGGTAGAATAGAAAGTCTGTTGAAGACAGGTTTTTTGGAGGGTCAAAT
TCTGGTACCAAACTTTGTTTTACAGGAGTTACAGCTTATTGCTGATGCTTCTAATGATCAAAAAAGAGTCAGAGGTAGAC
GAGGGTTAGATATTTTAAATAGACTTAAAGAGCTTTATCCTTCTCAAATTCAAATCCATTTTGCAGACTATGAAGAAATT
CCTACTGTGGATGCGAAGTTGGTTCGTTTTGCTCTGGAAATTAATGGTACTTTGTTGACGAATGATTACAATTTATCTAA
GGTTGCTAGTTTACAAAAGGTTCCTGTTCTCAATATTAACGACTTGACTCAAGCAGTAAGACCAAGTTATTTGCCTGGTG
ATACTATTGAAATCAAAATTCGTAAGGAAGGTAAAGAACCTTCTCAGGGTATTGGCTATTTAGATGATGGTACAATGGTT
GTTGTGGAGTCTGGTAGTGGATATGTTGGTGATGAGGTGCGGGTTATTGTGACCAGTTCTTTACAAACTTCTGCGGGTAG
GATGATTTTTGCTCGTACTCAAGAGTCAGCGATCGCTTAA

Upstream 100 bases:

>100_bases
CCAAAAATCATGGTTCTTAATCATTATTTTATTGGTTAGTACCTCATTAGAGAAATACCTCTTATAAAACAAAAAACAAA
ACAAAAAACAAACTAAAAAA

Downstream 100 bases:

>100_bases
TCAAATTAAAAGTTAAAACTCGTGCATTCAACAGTCAAAACTTAAAGCTTAAAAATTTGATCAAAGAGATCAGGCTATTA
GTTAGGGTGAGGATCAGTTT

Product: PilT protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MLDALIIISFVFAGAGIGFYSIELLPPNVLLEVTNIEGLRSVLSAFTSLIGFVVGLVFQTTYRRVEIKFRQMPVDLLLTR
AIGLIIGLLVANLMLAPLFLLPIPDEFSFIKPLVAVLASVMLGFTGVNVADTHGRGFLRLINPNSLDAVLVAEGTLKPST
TKILDTSCIIDGRIESLLKTGFLEGQILVPNFVLQELQLIADASNDQKRVRGRRGLDILNRLKELYPSQIQIHFADYEEI
PTVDAKLVRFALEINGTLLTNDYNLSKVASLQKVPVLNINDLTQAVRPSYLPGDTIEIKIRKEGKEPSQGIGYLDDGTMV
VVESGSGYVGDEVRVIVTSSLQTSAGRMIFARTQESAIA

Sequences:

>Translated_359_residues
MLDALIIISFVFAGAGIGFYSIELLPPNVLLEVTNIEGLRSVLSAFTSLIGFVVGLVFQTTYRRVEIKFRQMPVDLLLTR
AIGLIIGLLVANLMLAPLFLLPIPDEFSFIKPLVAVLASVMLGFTGVNVADTHGRGFLRLINPNSLDAVLVAEGTLKPST
TKILDTSCIIDGRIESLLKTGFLEGQILVPNFVLQELQLIADASNDQKRVRGRRGLDILNRLKELYPSQIQIHFADYEEI
PTVDAKLVRFALEINGTLLTNDYNLSKVASLQKVPVLNINDLTQAVRPSYLPGDTIEIKIRKEGKEPSQGIGYLDDGTMV
VVESGSGYVGDEVRVIVTSSLQTSAGRMIFARTQESAIA
>Mature_359_residues
MLDALIIISFVFAGAGIGFYSIELLPPNVLLEVTNIEGLRSVLSAFTSLIGFVVGLVFQTTYRRVEIKFRQMPVDLLLTR
AIGLIIGLLVANLMLAPLFLLPIPDEFSFIKPLVAVLASVMLGFTGVNVADTHGRGFLRLINPNSLDAVLVAEGTLKPST
TKILDTSCIIDGRIESLLKTGFLEGQILVPNFVLQELQLIADASNDQKRVRGRRGLDILNRLKELYPSQIQIHFADYEEI
PTVDAKLVRFALEINGTLLTNDYNLSKVASLQKVPVLNINDLTQAVRPSYLPGDTIEIKIRKEGKEPSQGIGYLDDGTMV
VVESGSGYVGDEVRVIVTSSLQTSAGRMIFARTQESAIA

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 39214; Mature: 39214

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDALIIISFVFAGAGIGFYSIELLPPNVLLEVTNIEGLRSVLSAFTSLIGFVVGLVFQT
CCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
TYRRVEIKFRQMPVDLLLTRAIGLIIGLLVANLMLAPLFLLPIPDEFSFIKPLVAVLASV
HHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHH
MLGFTGVNVADTHGRGFLRLINPNSLDAVLVAEGTLKPSTTKILDTSCIIDGRIESLLKT
HHCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEECCEEECHHHHHHHHH
GFLEGQILVPNFVLQELQLIADASNDQKRVRGRRGLDILNRLKELYPSQIQIHFADYEEI
CCCCCEEECHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCC
PTVDAKLVRFALEINGTLLTNDYNLSKVASLQKVPVLNINDLTQAVRPSYLPGDTIEIKI
CCHHHHHHHEEEEECCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEE
RKEGKEPSQGIGYLDDGTMVVVESGSGYVGDEVRVIVTSSLQTSAGRMIFARTQESAIA
EECCCCCCCCCCEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEECCHHCCC
>Mature Secondary Structure
MLDALIIISFVFAGAGIGFYSIELLPPNVLLEVTNIEGLRSVLSAFTSLIGFVVGLVFQT
CCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
TYRRVEIKFRQMPVDLLLTRAIGLIIGLLVANLMLAPLFLLPIPDEFSFIKPLVAVLASV
HHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHH
MLGFTGVNVADTHGRGFLRLINPNSLDAVLVAEGTLKPSTTKILDTSCIIDGRIESLLKT
HHCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEECCEEECHHHHHHHHH
GFLEGQILVPNFVLQELQLIADASNDQKRVRGRRGLDILNRLKELYPSQIQIHFADYEEI
CCCCCEEECHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCC
PTVDAKLVRFALEINGTLLTNDYNLSKVASLQKVPVLNINDLTQAVRPSYLPGDTIEIKI
CCHHHHHHHEEEEECCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEE
RKEGKEPSQGIGYLDDGTMVVVESGSGYVGDEVRVIVTSSLQTSAGRMIFARTQESAIA
EECCCCCCCCCCEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]