Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474935

Identifier: 113474935

GI number: 113474935

Start: 1822341

End: 1822685

Strand: Reverse

Name: 113474935

Synonym: Tery_1162

Alternate gene names: NA

Gene position: 1822685-1822341 (Counterclockwise)

Preceding gene: 113474936

Following gene: 113474934

Centisome position: 23.52

GC content: 26.09

Gene sequence:

>345_bases
ATGGGTGTATCATCAGGTGGTTATGCTGCAATATTATTTGGTTCATTATGTCATATAACAAATGTAATAAGTTTCATACC
GAGGACAAATTTAAAGGGAATTAGAGGAATAGTAGATAATAAGTATGAAAATTTAAAAAATATTATTAATAATGATACTG
ACTATTTATTATATGGAGACTTAAGTGTAAAGGATAAGAATCACAATCACCATATATCACAGTGCGAAAACTTAGAAGGT
TTTTCCAGCATCAAAATAGTTAAAAAAATTAGTTTAGATATGAAAAAATTAAGGGATGATGGAACAATCAAAAATGAATT
AGACAAGATTATTAATCAAGTATAA

Upstream 100 bases:

>100_bases
GTATCATAAAGGAATAGAAGGTATCTCAAATAATATTGATGAAACAACAGAATATTTAAAGGATAAAATAAATAAAAGGG
ATTATAAAAAAATAATATTT

Downstream 100 bases:

>100_bases
ATAAATTTTCCGGAGTTCAGAAATAGAAAGTGGTTTAGATTCATGCCTATGCCATTATACCTTTTTTTATAGATTTACAA
ATTATTCAGGTGGTCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MGVSSGGYAAILFGSLCHITNVISFIPRTNLKGIRGIVDNKYENLKNIINNDTDYLLYGDLSVKDKNHNHHISQCENLEG
FSSIKIVKKISLDMKKLRDDGTIKNELDKIINQV

Sequences:

>Translated_114_residues
MGVSSGGYAAILFGSLCHITNVISFIPRTNLKGIRGIVDNKYENLKNIINNDTDYLLYGDLSVKDKNHNHHISQCENLEG
FSSIKIVKKISLDMKKLRDDGTIKNELDKIINQV
>Mature_113_residues
GVSSGGYAAILFGSLCHITNVISFIPRTNLKGIRGIVDNKYENLKNIINNDTDYLLYGDLSVKDKNHNHHISQCENLEGF
SSIKIVKKISLDMKKLRDDGTIKNELDKIINQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12792; Mature: 12661

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSSGGYAAILFGSLCHITNVISFIPRTNLKGIRGIVDNKYENLKNIINNDTDYLLYGD
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC
LSVKDKNHNHHISQCENLEGFSSIKIVKKISLDMKKLRDDGTIKNELDKIINQV
EEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GVSSGGYAAILFGSLCHITNVISFIPRTNLKGIRGIVDNKYENLKNIINNDTDYLLYGD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC
LSVKDKNHNHHISQCENLEGFSSIKIVKKISLDMKKLRDDGTIKNELDKIINQV
EEECCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA