Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474930

Identifier: 113474930

GI number: 113474930

Start: 1814647

End: 1814958

Strand: Reverse

Name: 113474930

Synonym: Tery_1157

Alternate gene names: NA

Gene position: 1814958-1814647 (Counterclockwise)

Preceding gene: 113474931

Following gene: 113474929

Centisome position: 23.42

GC content: 32.37

Gene sequence:

>312_bases
ATGCTGTGGTTAGTAATAGAAATAAATATAATTATATCAATTTTTGGCTTTTTTCTAGCTTGGAAAATCTGGAGATTTAG
GCAAATATTATTAAAAGTAGAACGCAATCTTAGCCTCATAGATAATTACACCAGTAACATACTCACCAAAACACCTGAAT
TTTTGCAACTTCGACAGCAAAAAGTAAATCAAATACGACACCTATATCAACAACTGGATGGACAAGTTCAACAACTTCAA
CAAATAATAGCTATGTTTTGGTTGCTCAGAAATTTATGGCATCGTTGGAGTCGAACTTGGCATTCAAAGTAA

Upstream 100 bases:

>100_bases
TTCAAAATGGTCTAATATATGGTCTTACTGAAAATTATAGTCAATCTATAATTAGACTCTTTATAAGAGTTATTCTCGCT
AGTTTTTTGTGGAGTAAAAG

Downstream 100 bases:

>100_bases
CTTGGATTTATATTCTTGCCCAAGAACTTTATTACCAAGAGACTTCTAGCAATAGTGCCATTTATTTTTGAGTTTTACTA
GCATTAATGTGAACAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MLWLVIEINIIISIFGFFLAWKIWRFRQILLKVERNLSLIDNYTSNILTKTPEFLQLRQQKVNQIRHLYQQLDGQVQQLQ
QIIAMFWLLRNLWHRWSRTWHSK

Sequences:

>Translated_103_residues
MLWLVIEINIIISIFGFFLAWKIWRFRQILLKVERNLSLIDNYTSNILTKTPEFLQLRQQKVNQIRHLYQQLDGQVQQLQ
QIIAMFWLLRNLWHRWSRTWHSK
>Mature_103_residues
MLWLVIEINIIISIFGFFLAWKIWRFRQILLKVERNLSLIDNYTSNILTKTPEFLQLRQQKVNQIRHLYQQLDGQVQQLQ
QIIAMFWLLRNLWHRWSRTWHSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12806; Mature: 12806

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWLVIEINIIISIFGFFLAWKIWRFRQILLKVERNLSLIDNYTSNILTKTPEFLQLRQQ
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KVNQIRHLYQQLDGQVQQLQQIIAMFWLLRNLWHRWSRTWHSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLWLVIEINIIISIFGFFLAWKIWRFRQILLKVERNLSLIDNYTSNILTKTPEFLQLRQQ
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KVNQIRHLYQQLDGQVQQLQQIIAMFWLLRNLWHRWSRTWHSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA