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The map label for this gene is dppC [H]

Identifier: 113474900

GI number: 113474900

Start: 1772579

End: 1773457

Strand: Reverse

Name: dppC [H]

Synonym: Tery_1126

Alternate gene names: 113474900

Gene position: 1773457-1772579 (Counterclockwise)

Preceding gene: 113474901

Following gene: 113474898

Centisome position: 22.88

GC content: 34.47

Gene sequence:

>879_bases
ATGATAAGTAGATATTCACTAGCTAAATTTTTCCGGCTTTCTAGTAAACCCACTATTTCAATGCAGATGATGTGGCTGGG
TTTAATAGTTACATTGCTATTTATATTAATCAGTATTTTTGCTCCACTTTTAGAAAGTTTAGGTTGGTTGCAAGACCCTC
AAGAATTTCTCAGTAACCCTATACATCAACCACCTTCTTTTGAACATTGGTTTGGCACAAGTCGTCAAGGTTATGATGTA
TTTTCTCGAACTTTATTCGGCGCACAAGTTGCTTGGAAAGTTGTAATTTTAGCCACAACATTAAGTTTAATTATTGGTGT
GCCATTAGGAATGATAAGTGGTTATCTTGGAGGTAGAATTGATAAAGTTTTAATATTTTTTATGGATACTGTTTATACTT
TACCAGGATTATTACTTTCTATAACTTTAGCTTTTGTAGTTGGAAAAGGAATATTAAATGCAGCGATCGCTCTGAGTATT
GCTTATATTCCTCAGTATTATCGAGTAGTTCGTAACCATACAGTTAGTGTCAAAACAGAACTTTTTATTGAAGCAGCAAG
AGCGATGGGTGCTAATACTTGGAGAGTGTTGACTCGTTACTTATTTATGAATGTTATTCAGAGTGTTCCTGTGTTGTTTA
CTCTTAATGCTGCAGATGCAGTTTTAGTATTAGGAGGATTAGGATTTTTAGGATTAGGATTACCTCCTGAAACTGCTGAA
TGGGGAAATGATTTAAGGTTGGCTTTAAATGCTTTACCAACAGGTATTTGGTGGACTGCTTTTTTCCCTGGTTTTACTTT
AACTTTAATGGTGGTTGGACTCTCTTTATTAGGAGAAGGATTGAATGAATTTGTTAATCCTAAGTTGAGAAATCAGTAG

Upstream 100 bases:

>100_bases
AATGTATGAGATTTGATATAATTAATATTATATATCTACTTATTCAAGTATATCAGTTTATGCTAGAATTATAATTCCTA
AGTTGAGATATTACCAGATT

Downstream 100 bases:

>100_bases
ACTTTTATGAAAGCTAATTTAACTAACAAAAAAAAATATAAAGGTAGGTTTCGGAGCAGAAATTTGAGAATTTATGAAAA
CTATTAGCACGTCTATTTCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MISRYSLAKFFRLSSKPTISMQMMWLGLIVTLLFILISIFAPLLESLGWLQDPQEFLSNPIHQPPSFEHWFGTSRQGYDV
FSRTLFGAQVAWKVVILATTLSLIIGVPLGMISGYLGGRIDKVLIFFMDTVYTLPGLLLSITLAFVVGKGILNAAIALSI
AYIPQYYRVVRNHTVSVKTELFIEAARAMGANTWRVLTRYLFMNVIQSVPVLFTLNAADAVLVLGGLGFLGLGLPPETAE
WGNDLRLALNALPTGIWWTAFFPGFTLTLMVVGLSLLGEGLNEFVNPKLRNQ

Sequences:

>Translated_292_residues
MISRYSLAKFFRLSSKPTISMQMMWLGLIVTLLFILISIFAPLLESLGWLQDPQEFLSNPIHQPPSFEHWFGTSRQGYDV
FSRTLFGAQVAWKVVILATTLSLIIGVPLGMISGYLGGRIDKVLIFFMDTVYTLPGLLLSITLAFVVGKGILNAAIALSI
AYIPQYYRVVRNHTVSVKTELFIEAARAMGANTWRVLTRYLFMNVIQSVPVLFTLNAADAVLVLGGLGFLGLGLPPETAE
WGNDLRLALNALPTGIWWTAFFPGFTLTLMVVGLSLLGEGLNEFVNPKLRNQ
>Mature_292_residues
MISRYSLAKFFRLSSKPTISMQMMWLGLIVTLLFILISIFAPLLESLGWLQDPQEFLSNPIHQPPSFEHWFGTSRQGYDV
FSRTLFGAQVAWKVVILATTLSLIIGVPLGMISGYLGGRIDKVLIFFMDTVYTLPGLLLSITLAFVVGKGILNAAIALSI
AYIPQYYRVVRNHTVSVKTELFIEAARAMGANTWRVLTRYLFMNVIQSVPVLFTLNAADAVLVLGGLGFLGLGLPPETAE
WGNDLRLALNALPTGIWWTAFFPGFTLTLMVVGLSLLGEGLNEFVNPKLRNQ

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=33.6996336996337, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI1787760, Length=260, Percent_Identity=33.4615384615385, Blast_Score=161, Evalue=4e-41,
Organism=Escherichia coli, GI1789964, Length=265, Percent_Identity=34.3396226415094, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=33.6099585062241, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787498, Length=265, Percent_Identity=30.188679245283, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787549, Length=238, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788505, Length=232, Percent_Identity=25.8620689655172, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32334; Mature: 32334

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRYSLAKFFRLSSKPTISMQMMWLGLIVTLLFILISIFAPLLESLGWLQDPQEFLSNP
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
IHQPPSFEHWFGTSRQGYDVFSRTLFGAQVAWKVVILATTLSLIIGVPLGMISGYLGGRI
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DKVLIFFMDTVYTLPGLLLSITLAFVVGKGILNAAIALSIAYIPQYYRVVRNHTVSVKTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LFIEAARAMGANTWRVLTRYLFMNVIQSVPVLFTLNAADAVLVLGGLGFLGLGLPPETAE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHH
WGNDLRLALNALPTGIWWTAFFPGFTLTLMVVGLSLLGEGLNEFVNPKLRNQ
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISRYSLAKFFRLSSKPTISMQMMWLGLIVTLLFILISIFAPLLESLGWLQDPQEFLSNP
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
IHQPPSFEHWFGTSRQGYDVFSRTLFGAQVAWKVVILATTLSLIIGVPLGMISGYLGGRI
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DKVLIFFMDTVYTLPGLLLSITLAFVVGKGILNAAIALSIAYIPQYYRVVRNHTVSVKTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LFIEAARAMGANTWRVLTRYLFMNVIQSVPVLFTLNAADAVLVLGGLGFLGLGLPPETAE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHH
WGNDLRLALNALPTGIWWTAFFPGFTLTLMVVGLSLLGEGLNEFVNPKLRNQ
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]