Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474897

Identifier: 113474897

GI number: 113474897

Start: 1766406

End: 1766873

Strand: Reverse

Name: 113474897

Synonym: Tery_1123

Alternate gene names: NA

Gene position: 1766873-1766406 (Counterclockwise)

Preceding gene: 113474898

Following gene: 113474894

Centisome position: 22.8

GC content: 36.97

Gene sequence:

>468_bases
ATGATGATGCGATCGCAAGTAGTTTCTGGTTGGCCTGGTTTACTGGTTGATGGATATGATCAGGTTGTAAGTAATTTAGA
TGCAATTGACCCCACAGAAGCCAACCTTCTACCCCTACTACGAATGGAAACCTTAGTTAAAGATGTGTTACTTTGTTTAT
TTGAAGGAGAAATCAAAACCGTTGATATTCACTTACAACCGGAGTCAATGCACTTTGGGTTAGATGCACCAACAGAAGAT
TATCCTCAATGGTCAAAAAATCTACGAGATAGTGACGGAGAATTAATGAAAGACTCTATTTCTATTCCTTGGAAAAACGA
AACAAAAGAAGTCATTGATTTACAAAAGTTTGCTAGACATAACCAAGAGACTCTAACCATCTCAGATGAATTTACCCCTG
GTCAATTTGGCTTACAAATGATAGAAGGTGTTCAAAAAGTTAGACTTGTTTTTAAGGAGTCAGTCTAA

Upstream 100 bases:

>100_bases
GTTTAGTGTTGGTCGTGTTACGAAAGGTGATTTATCAGACGATAAAAAAATTACAGAACTTAACAATTTTCTGCGTCAGC
AAAATCAAACAATTAGTGGA

Downstream 100 bases:

>100_bases
TTGGAGCAGAAAAAAACGTCAATAGATTTCAGAAAAAAGTTATGGAACAGAAGCAGGTATTAATTGAGTCAGTTAACGAC
CAACTGAAAAATATCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MMMRSQVVSGWPGLLVDGYDQVVSNLDAIDPTEANLLPLLRMETLVKDVLLCLFEGEIKTVDIHLQPESMHFGLDAPTED
YPQWSKNLRDSDGELMKDSISIPWKNETKEVIDLQKFARHNQETLTISDEFTPGQFGLQMIEGVQKVRLVFKESV

Sequences:

>Translated_155_residues
MMMRSQVVSGWPGLLVDGYDQVVSNLDAIDPTEANLLPLLRMETLVKDVLLCLFEGEIKTVDIHLQPESMHFGLDAPTED
YPQWSKNLRDSDGELMKDSISIPWKNETKEVIDLQKFARHNQETLTISDEFTPGQFGLQMIEGVQKVRLVFKESV
>Mature_155_residues
MMMRSQVVSGWPGLLVDGYDQVVSNLDAIDPTEANLLPLLRMETLVKDVLLCLFEGEIKTVDIHLQPESMHFGLDAPTED
YPQWSKNLRDSDGELMKDSISIPWKNETKEVIDLQKFARHNQETLTISDEFTPGQFGLQMIEGVQKVRLVFKESV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17650; Mature: 17650

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMRSQVVSGWPGLLVDGYDQVVSNLDAIDPTEANLLPLLRMETLVKDVLLCLFEGEIKT
CCCCCCHHCCCCCCEECCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
VDIHLQPESMHFGLDAPTEDYPQWSKNLRDSDGELMKDSISIPWKNETKEVIDLQKFARH
EEEEECCCCEEECCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCC
NQETLTISDEFTPGQFGLQMIEGVQKVRLVFKESV
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMMRSQVVSGWPGLLVDGYDQVVSNLDAIDPTEANLLPLLRMETLVKDVLLCLFEGEIKT
CCCCCCHHCCCCCCEECCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
VDIHLQPESMHFGLDAPTEDYPQWSKNLRDSDGELMKDSISIPWKNETKEVIDLQKFARH
EEEEECCCCEEECCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCC
NQETLTISDEFTPGQFGLQMIEGVQKVRLVFKESV
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA