Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474887

Identifier: 113474887

GI number: 113474887

Start: 1749582

End: 1749935

Strand: Direct

Name: 113474887

Synonym: Tery_1112

Alternate gene names: NA

Gene position: 1749582-1749935 (Clockwise)

Preceding gene: 113474886

Following gene: 113474888

Centisome position: 22.57

GC content: 37.01

Gene sequence:

>354_bases
ATGGATTATGAAACCGCCCGCCAATTTCTCATTGACCAGGGAACTGCTCTAGAAACTAAAATTAACCCAGATGCTTTTCT
CATGCGTCTCGAACAAGGCAAACCCCCCATTCCTGGTCAAGTAACTAACATTTTGTTAGCTCTAAAAATATCCTTTGAAA
CATTACAAGGCGACCCCCTTCTAGACCGAGAATTAGTTGCCGGATTATATTTATTAGCAATAGAAAGTCTGAAATTATTT
GAAGCAGGTAGACGAAAAAGAGTTATGTGGCCACCACTTTTAAAAGAAGATATCGAACGAATTACAATTGCCGTGAAAAA
TATTTTTTCTGGAGTTGTTTCTAAAGTAAAATAA

Upstream 100 bases:

>100_bases
AGGTTTATATAATAATCTGCCCATTGGTTGTGAAAATTTTTATCACAGTAAACTAGAAACGACTAGAATTAATATTATAA
AGACAACTATACTTTATAAT

Downstream 100 bases:

>100_bases
TACTTTAGATCAAATCTACTTGCTTTGGAGTGTTATTGGAAACTGGGTTTATGGGAGGTAGATATAATAGAAAAATAATA
AATGTTTTTTACAGTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPLLDRELVAGLYLLAIESLKLF
EAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK

Sequences:

>Translated_117_residues
MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPLLDRELVAGLYLLAIESLKLF
EAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK
>Mature_117_residues
MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPLLDRELVAGLYLLAIESLKLF
EAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13208; Mature: 13208

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPL
CCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHEEEHHHCCCCCC
LDRELVAGLYLLAIESLKLFEAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPL
CCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHEEEHHHCCCCCC
LDRELVAGLYLLAIESLKLFEAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA