| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474887
Identifier: 113474887
GI number: 113474887
Start: 1749582
End: 1749935
Strand: Direct
Name: 113474887
Synonym: Tery_1112
Alternate gene names: NA
Gene position: 1749582-1749935 (Clockwise)
Preceding gene: 113474886
Following gene: 113474888
Centisome position: 22.57
GC content: 37.01
Gene sequence:
>354_bases ATGGATTATGAAACCGCCCGCCAATTTCTCATTGACCAGGGAACTGCTCTAGAAACTAAAATTAACCCAGATGCTTTTCT CATGCGTCTCGAACAAGGCAAACCCCCCATTCCTGGTCAAGTAACTAACATTTTGTTAGCTCTAAAAATATCCTTTGAAA CATTACAAGGCGACCCCCTTCTAGACCGAGAATTAGTTGCCGGATTATATTTATTAGCAATAGAAAGTCTGAAATTATTT GAAGCAGGTAGACGAAAAAGAGTTATGTGGCCACCACTTTTAAAAGAAGATATCGAACGAATTACAATTGCCGTGAAAAA TATTTTTTCTGGAGTTGTTTCTAAAGTAAAATAA
Upstream 100 bases:
>100_bases AGGTTTATATAATAATCTGCCCATTGGTTGTGAAAATTTTTATCACAGTAAACTAGAAACGACTAGAATTAATATTATAA AGACAACTATACTTTATAAT
Downstream 100 bases:
>100_bases TACTTTAGATCAAATCTACTTGCTTTGGAGTGTTATTGGAAACTGGGTTTATGGGAGGTAGATATAATAGAAAAATAATA AATGTTTTTTACAGTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPLLDRELVAGLYLLAIESLKLF EAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK
Sequences:
>Translated_117_residues MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPLLDRELVAGLYLLAIESLKLF EAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK >Mature_117_residues MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPLLDRELVAGLYLLAIESLKLF EAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13208; Mature: 13208
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPL CCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHEEEHHHCCCCCC LDRELVAGLYLLAIESLKLFEAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDYETARQFLIDQGTALETKINPDAFLMRLEQGKPPIPGQVTNILLALKISFETLQGDPL CCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHEEEHHHCCCCCC LDRELVAGLYLLAIESLKLFEAGRRKRVMWPPLLKEDIERITIAVKNIFSGVVSKVK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA