| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474886
Identifier: 113474886
GI number: 113474886
Start: 1747476
End: 1748141
Strand: Direct
Name: 113474886
Synonym: Tery_1110
Alternate gene names: NA
Gene position: 1747476-1748141 (Clockwise)
Preceding gene: 113474878
Following gene: 113474887
Centisome position: 22.55
GC content: 28.83
Gene sequence:
>666_bases ATGAGTATTACTTGTGATTTATGTTTCTACAACAGAAACTCAGAAAAAAACAAATTTTGCGAAGTTTGTGGTTCAGAAAT TAGACTATCAACTACTTTATTGAAAACTCAAGAAAAAAGTATTCAAGAGGGAGAAATACAAACAGCTATCCAAACAGACA AAAACACAGTAAACCAGGATAAAGATATTAATCAAAATATTAATAACTACTTCCTAAAAACACCGACATATATCAATAAA ACTACTAGTCAAAATCCAATTATAGAAGCAGATAAAAAAGTAAATATGACACCTAAAAATGCTATTAATTCTACTCTCAT CAATAGCAGTATTGTTAAACTTATCCCCAAACAAATAGGTGCTCCTATACCAGAATTTATTATCGATAGCAATAATGCCA TTATTGGTAAATTTAACCCAGAAATAGGACCAGTAGAAATTGATTTAGATGGATTTTATGGAGACAATACTGTTTCCTTA ACCCATGCAGAAATCTATTTTAAAAATAATCAATGGCAGATAAAAGACATGGGTTCTACTAATGGTATTTATATCAAACA TATAGGAAAAACTAGGTTTGGATACCGTATCAATAAACCAGAAATATTAAACTCAGGAGATGAAATTGCCATAGGTAAAA TTAGGTTACTATTTATAATTAGTTGA
Upstream 100 bases:
>100_bases CTTGGTTTATAAATTATGTAAACATTCAACTCTTATGGCATAAGTTTAGAATCAACATCACAATTATTTAGTAAAGCTAA ATCAATTATTTAGGAAGATT
Downstream 100 bases:
>100_bases ACGTAACTATAGGATGGATATTGTTGATAAGTAAACATTGAGCTATTAACTATCAGCTCTCAGCAATAATACTCTGCTTT TGTAGTAATATTTAATACCA
Product: FHA domain-containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Serine/Threonine Protein Kinase With FHA Domain; FraH-Related Protein
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSITCDLCFYNRNSEKNKFCEVCGSEIRLSTTLLKTQEKSIQEGEIQTAIQTDKNTVNQDKDINQNINNYFLKTPTYINK TTSQNPIIEADKKVNMTPKNAINSTLINSSIVKLIPKQIGAPIPEFIIDSNNAIIGKFNPEIGPVEIDLDGFYGDNTVSL THAEIYFKNNQWQIKDMGSTNGIYIKHIGKTRFGYRINKPEILNSGDEIAIGKIRLLFIIS
Sequences:
>Translated_221_residues MSITCDLCFYNRNSEKNKFCEVCGSEIRLSTTLLKTQEKSIQEGEIQTAIQTDKNTVNQDKDINQNINNYFLKTPTYINK TTSQNPIIEADKKVNMTPKNAINSTLINSSIVKLIPKQIGAPIPEFIIDSNNAIIGKFNPEIGPVEIDLDGFYGDNTVSL THAEIYFKNNQWQIKDMGSTNGIYIKHIGKTRFGYRINKPEILNSGDEIAIGKIRLLFIIS >Mature_220_residues SITCDLCFYNRNSEKNKFCEVCGSEIRLSTTLLKTQEKSIQEGEIQTAIQTDKNTVNQDKDINQNINNYFLKTPTYINKT TSQNPIIEADKKVNMTPKNAINSTLINSSIVKLIPKQIGAPIPEFIIDSNNAIIGKFNPEIGPVEIDLDGFYGDNTVSLT HAEIYFKNNQWQIKDMGSTNGIYIKHIGKTRFGYRINKPEILNSGDEIAIGKIRLLFIIS
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24912; Mature: 24781
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITCDLCFYNRNSEKNKFCEVCGSEIRLSTTLLKTQEKSIQEGEIQTAIQTDKNTVNQD CEEEEEEEEECCCCCCHHHHHHCCCCEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCC KDINQNINNYFLKTPTYINKTTSQNPIIEADKKVNMTPKNAINSTLINSSIVKLIPKQIG CCCCCCCCEEEEECCCEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC APIPEFIIDSNNAIIGKFNPEIGPVEIDLDGFYGDNTVSLTHAEIYFKNNQWQIKDMGST CCCCCEEECCCCEEEEEECCCCCCEEEEECCEECCCEEEEEEEEEEEECCEEEEEECCCC NGIYIKHIGKTRFGYRINKPEILNSGDEIAIGKIRLLFIIS CCEEEEEECCCCCCEEECCCHHCCCCCCEEEEEEEEEEEEC >Mature Secondary Structure SITCDLCFYNRNSEKNKFCEVCGSEIRLSTTLLKTQEKSIQEGEIQTAIQTDKNTVNQD EEEEEEEEECCCCCCHHHHHHCCCCEEEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCC KDINQNINNYFLKTPTYINKTTSQNPIIEADKKVNMTPKNAINSTLINSSIVKLIPKQIG CCCCCCCCEEEEECCCEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC APIPEFIIDSNNAIIGKFNPEIGPVEIDLDGFYGDNTVSLTHAEIYFKNNQWQIKDMGST CCCCCEEECCCCEEEEEECCCCCCEEEEECCEECCCEEEEEEEEEEEECCEEEEEECCCC NGIYIKHIGKTRFGYRINKPEILNSGDEIAIGKIRLLFIIS CCEEEEEECCCCCCEEECCCHHCCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA