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The map label for this gene is ybhR [C]

Identifier: 113474860

GI number: 113474860

Start: 1696856

End: 1697746

Strand: Direct

Name: ybhR [C]

Synonym: Tery_1079

Alternate gene names: 113474860

Gene position: 1696856-1697746 (Clockwise)

Preceding gene: 113474856

Following gene: 113474861

Centisome position: 21.89

GC content: 40.07

Gene sequence:

>891_bases
ATGAGTAGCACTATTACACCTTCTCAAGAGAATATAAGTCAGTTGTCTGACGCTAAGACGACAACCTTTACTTCGGGTTC
CCTAGTAGGAGATTTTTTTCAAGAAACTCTAGCATTAACCCGTCGGTTATTTATTCAACTGAAGCGACGACCTTCTACTT
TAATTGCTGGAATTATTCAACCTCTGATGTGGTTAATTCTATTTGGGGCACTTTTCCAAAATGTACCTCAAGGCTTATTT
GGTGAAAGTCAAAACTACGGACAGTTTCTCGGTGCTGGTATTATTGTCTTTACTGCTTTTGCTGGTGCCCTTAATGCAGG
CTTACCAGTGATGTTTGACCGAGAGTTTGGTTTTCTCAACCGCCTATTGGTAGCGCCATTGACATCCCGCTTTTCTATTG
TCTTAGCCTCAGCTACTTTTATCGTCACCCTGAGTTTACTTCAATCAGCTATTATCATTGGTGCAGGTGCATTTTTGGGT
GCAGGATTACCTAATATATTGGGATTAGCTACGATCGCCCTGATTATTTTAATGTTAGTTTTGGGTGTGACTGGTTTAAG
CTTGGGTCTGGCTTTTGCTTTACCAGGTCACATTGAACTTTTGGCCGTGATTTTTGTAACTAATTTACCTTTGTTATTTG
CTAGCACTGCTCTGGCACCTCTATCTTTTATGCCGAGTTGGTTACAAGTAGTAGCTAGTTTAAATCCTTTGAGCTATGCG
ATCGAACCTATTCGTTATCTGTATCTACATCATAATTTCTCTTTTGGTAGTGTAGTTATGGAAGCGCCTTTTGGTGATAT
TTCCTTTGGGATAGCATTACTAGTGCTATTAGTTTTTGATATTGTGACTCTAGTCGCAATTCAACCTCTATTACGTCGTC
GGTTTGCCTAG

Upstream 100 bases:

>100_bases
TAATTTAACCTAATTGGACAGTTTTTAATCACTAGTTCCAAGATAATATAATATAAAATAAACTCTCTAGGATCTCCATT
AATAATATCTAAAGTCTAAT

Downstream 100 bases:

>100_bases
ATGTGATATCCTCCAACCCTTAGCCTATAGGTAAAACAAAGACTGACCTATCTCACAAGTTCAGCATTCGGTACTATCAT
ATTACTTGTCTAGTTCATAG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: Multidrug Efflux ABC Transporter; ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; Multidrug ABC Transporter Permease Protein; ABC-Type Multidrug Transport System ATPase Component; Multidrug ABC Transporter; ABC Transporter; ABC Transporter Permease Protein; Drug Exporter ABC Transporter Permease; Multidrug ABC Transporter Permease Component; ABC-2 Type Tranporter

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSSTITPSQENISQLSDAKTTTFTSGSLVGDFFQETLALTRRLFIQLKRRPSTLIAGIIQPLMWLILFGALFQNVPQGLF
GESQNYGQFLGAGIIVFTAFAGALNAGLPVMFDREFGFLNRLLVAPLTSRFSIVLASATFIVTLSLLQSAIIIGAGAFLG
AGLPNILGLATIALIILMLVLGVTGLSLGLAFALPGHIELLAVIFVTNLPLLFASTALAPLSFMPSWLQVVASLNPLSYA
IEPIRYLYLHHNFSFGSVVMEAPFGDISFGIALLVLLVFDIVTLVAIQPLLRRRFA

Sequences:

>Translated_296_residues
MSSTITPSQENISQLSDAKTTTFTSGSLVGDFFQETLALTRRLFIQLKRRPSTLIAGIIQPLMWLILFGALFQNVPQGLF
GESQNYGQFLGAGIIVFTAFAGALNAGLPVMFDREFGFLNRLLVAPLTSRFSIVLASATFIVTLSLLQSAIIIGAGAFLG
AGLPNILGLATIALIILMLVLGVTGLSLGLAFALPGHIELLAVIFVTNLPLLFASTALAPLSFMPSWLQVVASLNPLSYA
IEPIRYLYLHHNFSFGSVVMEAPFGDISFGIALLVLLVFDIVTLVAIQPLLRRRFA
>Mature_295_residues
SSTITPSQENISQLSDAKTTTFTSGSLVGDFFQETLALTRRLFIQLKRRPSTLIAGIIQPLMWLILFGALFQNVPQGLFG
ESQNYGQFLGAGIIVFTAFAGALNAGLPVMFDREFGFLNRLLVAPLTSRFSIVLASATFIVTLSLLQSAIIIGAGAFLGA
GLPNILGLATIALIILMLVLGVTGLSLGLAFALPGHIELLAVIFVTNLPLLFASTALAPLSFMPSWLQVVASLNPLSYAI
EPIRYLYLHHNFSFGSVVMEAPFGDISFGIALLVLLVFDIVTLVAIQPLLRRRFA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31804; Mature: 31673

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTITPSQENISQLSDAKTTTFTSGSLVGDFFQETLALTRRLFIQLKRRPSTLIAGIIQ
CCCCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
PLMWLILFGALFQNVPQGLFGESQNYGQFLGAGIIVFTAFAGALNAGLPVMFDREFGFLN
HHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH
RLLVAPLTSRFSIVLASATFIVTLSLLQSAIIIGAGAFLGAGLPNILGLATIALIILMLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGVTGLSLGLAFALPGHIELLAVIFVTNLPLLFASTALAPLSFMPSWLQVVASLNPLSYA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
IEPIRYLYLHHNFSFGSVVMEAPFGDISFGIALLVLLVFDIVTLVAIQPLLRRRFA
HHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSTITPSQENISQLSDAKTTTFTSGSLVGDFFQETLALTRRLFIQLKRRPSTLIAGIIQ
CCCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
PLMWLILFGALFQNVPQGLFGESQNYGQFLGAGIIVFTAFAGALNAGLPVMFDREFGFLN
HHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH
RLLVAPLTSRFSIVLASATFIVTLSLLQSAIIIGAGAFLGAGLPNILGLATIALIILMLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGVTGLSLGLAFALPGHIELLAVIFVTNLPLLFASTALAPLSFMPSWLQVVASLNPLSYA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
IEPIRYLYLHHNFSFGSVVMEAPFGDISFGIALLVLLVFDIVTLVAIQPLLRRRFA
HHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA